Table 1. iAtlas data files.
Filename | Description |
---|---|
fmx_df.feather | All immune readout features/variables (11,080) across samples (139). |
feature_df.feather | Additional annotations for a subset (104) features. |
feature_method_df.feather | Annotation of methods (21) used to compute features. |
im_direct_relationships.feather | Annotation and source of immunomodulators genes (79). |
im_expr_df.feather | Gene expression for immunomodulators genes (76) across samples (9,693). |
im_potential_factors.feather | Additional genes (97) that have potential to be involved in immune modulation. |
io_target_annotations.feather | Annotation of immuno-oncology target genes (405). |
io_target_expr_df.feather | Gene expression for immuno-oncology target genes (401) across samples (9,693) |
sample_group_df.feather | Annotation of the sample groups (137 - TCGA studies, TCGA cancer subtypes and
Immune Subtypes). |