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. 2020 Aug 24;9:1028. [Version 1] doi: 10.12688/f1000research.25141.1

Table 1. iAtlas data files.

Filename Description
fmx_df.feather All immune readout features/variables (11,080) across samples (139).
feature_df.feather Additional annotations for a subset (104) features.
feature_method_df.feather Annotation of methods (21) used to compute features.
im_direct_relationships.feather Annotation and source of immunomodulators genes (79).
im_expr_df.feather Gene expression for immunomodulators genes (76) across samples (9,693).
im_potential_factors.feather Additional genes (97) that have potential to be involved in immune modulation.
io_target_annotations.feather Annotation of immuno-oncology target genes (405).
io_target_expr_df.feather Gene expression for immuno-oncology target genes (401) across samples (9,693)
sample_group_df.feather Annotation of the sample groups (137 - TCGA studies, TCGA cancer subtypes and
Immune Subtypes).