Antibodies |
|
Pacific Orange live/dead stain |
Invitrogen |
L34959 |
Anti-human HBcAg |
Abcam |
#7841 |
Anti-human HBsAg |
Raybiotech |
#MD050186
|
Goat-anti-rabbit CF555 |
Sigma Aldrich |
SAB46000068 |
Goat-anti-mouse APC |
Life Technologies |
AB_2536211 |
Goat-anti-mouse PE |
Life Technologies |
AB_2539848 |
HBs183-191 TCR-like antibody |
Sastry et al., 2011 |
N/A |
HBc18-27 TCR-like antibody |
Sastry et al., 2011 |
N/A |
Anti-human CD107a FITC |
BD Biosciences |
560949 |
Anti-human CD8 V500 |
BD Horizon |
560774 |
Anti-human IFN-γ PeCy7 |
eBiosciences |
AB_469682 |
Anti-human TNF-α PE |
BD Bioscience |
559321 |
HBs183-191 PE pentamer |
ProImmune |
WB3290-PE |
HBs370 PE pentamer |
ProImmune |
WB4073-PE |
EBV PE pentamer |
ProImmune |
WB2144-PE |
|
Biological Samples |
|
Human pathological liver tissue |
Asian American Liver Centre, Gleneagles Hospital |
https://www.aamg.co/liver/ |
Human HBV/HDV patient blood |
Fonsazione IRCCS Ca’Granda Ospedale Maggiore Policlinico |
https://www.policlinico.mi.it/ |
Human healthy blood |
Health Sciences Authority |
https://www.hsa.gov.sg/ |
|
Chemicals, Peptides, and Recombinant Proteins |
|
Recombinant Human IL-2 |
R&D systems |
202-1L-050 |
Anti-CD3 |
eBioscience |
AB_468854 |
Ficoll-Paque PLUS |
GE Healthcare |
17-1440-02 |
BD Cytofix/Cytoperm Fixation |
BD Bioscience |
51-2090 KZ |
Recombinant Human IFN-α2a |
PBL |
11100-1 |
Recombinant Human IFN-β |
Peprotech |
300-02BC |
Recombinant Human IL-29/IFN-λ1 |
R&D systems |
1598-IL-025 |
|
Critical Commercial Assays |
|
Primeflow assay with customized probeset |
Invitrogen |
EB 16488 |
Nanostring human immunology version 2 and customized probes assay |
Nanostring technologies |
XT-CSO-HIM2-12 |
FASER PE amplification kit |
Miltenyi |
130-091-764 |
One Shot Top10 E. coli kit |
Invitrogen |
C404003 |
QIAamp minELute virus spin kit |
QIAGEN |
57704w |
Rneasy Mini kit |
QIAGEN |
74004 |
mMESSAGE mMACHINE T7 Ultra kit |
Ambion |
AM1345 |
Nucelofactor kit |
Lonza |
V4XP-3024 |
Human serum albumin ELISA quantification kit |
Bethyl Laboratories |
E88-129 |
RNAScope Fluorescent Multiplex kit |
Advanced Cell Diagnostics |
320850 |
HBV Artus kit |
QIAGEN |
4506265 |
Quantitative HBsAg kit |
Abbott Architect Platform |
6C36 |
|
Experimental Models: Cell Lines |
|
Primary human hepatocytes (Fresh) |
Invitrocue |
5M-000S |
Primary human hepatocytes (Cryopreserved) |
Lonza |
HUM4012 |
HepG2-hNTCP cells |
Laboratory of Stephan Urban |
N/A |
HepG2 cells |
ATCC |
HB-8065 |
Huh7-hNTCP cells |
Laboratory of Camile Sureau |
N/A |
HepAD38 cells |
Laboratory of Christoph Seeger |
N/A |
HBV HBc18-27 and HBs183-191 T cell clones |
38 |
N/A |
|
Experimental Models: Organisms/Strains |
|
uPA/SCID/ILγR2 (USG) mice |
21 |
N/A |
|
Oligonucleotides |
|
HDV forward and reverse primers |
49 |
N/A |
RNA in situ primers |
34 |
N/A |
|
Recombinant DNA |
|
pSVLD-3 plasmid |
Laboratory of Camile Sureau |
Addgene: #29335 |
pT7HB2.7 plasmid |
N/A |
pVAC-HBs183 and -HBs370 |
50,51
|
N/A |
|
Software and Algorithms |
|
FACSDiva |
BD Bioscience |
https://www.bdbiosciences.com/en-us/instruments/research-instruments/research-software/flow-cytometry-acquisition/facsdiva-software |
GraphPad Prism 8 |
GraphPad |
https://www.graphpad.com/scientific-software/prism/ |
IDEAS software |
Amnis |
https://www.luminexcorp.com/imagestreamx-mk-ii/ |
Kaluza software |
Beckman Coulter |
https://www.beckman.com/flow-cytometry/software/kaluza |
nSolver version 4.0 |
Nanostring techonologies |
https://www.nanostring.com/products/analysis-software/nsolver |