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. 2020 Sep 27;6(1):dvaa010. doi: 10.1093/eep/dvaa010

Table 2:

Differentially methylated F1 genes involved in the endocrine system, drug metabolism, histone modifications, or DNA methylation

Gene symbol Gene name DMRs DMSs
Endocrine
 esr1a Estrogen receptor 1 1 ↓ 1 ↓
 esr2ab Estrogen receptor2a 2 ↓ 0
 esr2bb Estrogen receptor 2b 5 ↓ 0
 hsd17b10a Hydroxysteroid (17-beta) dehydrogenase 10 1 ↑, 3 ↓ 1 ↑, 1 ↓
 mdm2a MDM2 proto-oncogene 4 ↓ 2 ↓
 nr5a2b Nuclear receptor subfamily 5, group A, member 2 4 ↑, 5 ↓ 0
 ncoa4a Nuclear receptor coactivator 4 3 ↑, 1 ↓ 1 ↑
Xenobiotic metabolism
 ahr1ab Aryl hydrocarbon receptor 1a 2 ↑ 0
 ahr1ba Aryl hydrocarbon receptor 1b 1 ↑, 2 ↓ 2 ↓
 ahr2a Aryl hydrocarbon receptor 2 1 ↑, 6 ↓ 3 ↑, 2 ↓
Histone modification
 setd7a SET domain containing 7, histone lysine methyltransferase 1 ↑ 1 ↑
 jak2ab Janus kinase 2a 3 ↑ 0
 jak2b Janus kinase 2b 0 1 ↑
 rbl1a Retinoblastoma-like 1 1 ↑, 2 ↓ 2 ↑
 rcor1a REST corepressor 1 3 ↓ 1 ↓
 taf6l TAF6-like RNA polymerase II 0 2 ↑
 mrgbpa MRG/MORF4L-binding protein 4 ↑, 6 ↓ 2 ↑
 brpf1b Bromodomain and PHD finger containing, 1 2 ↑, 3 ↓ 0
 carm1b Coactivator-associated arginine methyltransferase 1 2 ↓ 0
 ehmt2b Euchromatic histone-lysine N-methyltransferase 2 2 ↓ 0
 hmga2b High mobility group AT-hook 2 1 ↓ 0
 kdm5bbb Lysine (K)-specific demethylase 5Bb 2 ↓ 0
 ncor1b Nuclear receptor corepressor 1 2 ↑ 0
 ncor2b Nuclear receptor corepressor 2 2 ↑, 2 ↓ 0
 pak2bb p21 protein (Cdc42/Rac)-activated kinase 2b 2 ↓ 0
 phc2aa Polyhomeotic homolog 2a 2 ↓ 1 ↑, 1 ↓
 prkcbbb Protein kinase C beta b 2 ↓ 0
 raraab Retinoic acid receptor, alpha a 2 ↑ 0
 rarabb Retinoic acid receptor, alpha b 1 ↑, 3 ↓ 0
 psme4ba Proteasome activator subunit 4b 1 ↑, 1 ↓ 1 ↑
 cnr1a Cannabinoid receptor 1 1 ↓ 1 ↓
 rfx2a Regulatory factor X, 2  2 ↓ 2 ↓
 alkbh1 AlkB homolog 1, histone H2A dioxygenase 0 2 ↑, 2 ↓
DNA methylation
 dnmt3aab DNA (cytosine-5-)-methyltransferase 3 alpha a 1 ↑ 0
 dnmt3abb DNA (cytosine-5-)-methyltransferase 3 alpha b 2 ↓ 0
 dnmt3ba DNA (cytosine-5-)-methyltransferase 3 beta a 1 ↓ 1 ↑
 ppm1dba Protein phosphatase, Mg2+/Mn2+ dependent, 1Db 2 ↑ 1 ↑

Numbers of DMSs and regions are shown with direction of methylation change.

a

Gene is associated with a DMS.

b

Gene is associated with a DMR.