Table 9:
Fold changes and P-values of differentially expressed F1 and F2 genes involved in epigenetic processes
| Gene symbol | Gene name | Fold change | P-value |
|---|---|---|---|
| F1 genes | |||
| anp32e | Acidic (leucine-rich) nuclear phosphoprotein 32 family, member E | −1.21 | 4.31E−02 |
| atf3 | Activating transcription factor 3 | 1.80 | 2.45E−03 |
| gfi1b | Growth factor-independent 1B transcription repressor | 1.81 | 4.81E−02 |
| hoxa10b | Homeobox A10b | −1.33 | 2.34E−02 |
| ino80c | INO80 complex subunit C | −1.26 | 3.39E−02 |
| insm1b | Insulinoma-associated 1b | 1.22 | 5.57E−03 |
| jade2 | Jade family PHD finger 2 | 1.29 | 8.97E−03 |
| kdm6bb | Lysine (K)-specific demethylase 6B, b | 1.61 | 3.99E−02 |
| l3mbtl2 | L3MBTL histone methyl-lysine-binding protein 2 | −1.37 | 2.83E−02 |
| loxl2a | Lysyl oxidase-like 2a | 2.26 | 1.10E−02 |
| mark3a | MAP/microtubule affinity-regulating kinase 3a | −1.60 | 3.17E−02 |
| mat2b | Methionine adenosyltransferase II, beta | −1.53 | 3.16E−02 |
| mthfd1l | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like | −2.10 | 9.39E−03 |
| mtrr | 5-Methyltetrahydrofolate-homocysteine methyltransferase reductase | −1.42 | 1.93E−02 |
| nlk2 | Nemo-like kinase, type 2 | 1.24 | 3.17E−02 |
| prdm6 | PR domain containing 6 | 1.28 | 6.04E−03 |
| sall1a | Spalt-like transcription factor 1a | 1.80 | 3.25E−02 |
| smarca4a | SWI/SNF related, matrix associated, actin-dependent regulator of chromatin, subfamily a, member 4a | −1.39 | 2.99E−02 |
| smarcc1b | SWI/SNF related, matrix associated, actin-dependent regulator of chromatin, subfamily c, member 1b | −1.79 | 3.49E−02 |
| smyd1a | SET and MYND domain containing 1a | −3.60 | 6.41E−03 |
| supt7l | SPT7 like, STAGA complex subunit gamma | −1.39 | 3.75E−02 |
| ube2a | Ubiquitin-conjugating enzyme E2A (RAD6 homolog) | −1.47 | 2.78E−02 |
| usp49 | Ubiquitin-specific peptidase 49 | −1.49 | 4.90E−02 |
| vrk1 | VRK serine/threonine kinase 1 | 1.23 | 4.12E−02 |
| zbtb38 | Zinc finger and BTB domain containing 38 | 1.32 | 4.08E−02 |
| F2 genes | |||
| actr5 | Actin-related protein 5 | −1.45 | 2.29E−02 |
| arid1ab | AT rich interactive domain 1Ab (SWI-like) | −1.23 | 3.33E−02 |
| auts2a | Activator of transcription and developmental regulator AUTS2 a | −1.22 | 1.08E−02 |
| brms1la | BRMS1 like transcriptional repressor a | −2.57 | 2.57E−02 |
| hdac10 | Histone deacetylase 10 | 1.29 | 3.38E−02 |
| jdp2b | JUN dimerization protein 2b | −1.20 | 1.35E−02 |
| kmt2d | Lysine (K)-specific methyltransferase 2D | −1.30 | 2.02E−02 |
| kmt5aa | Lysine methyltransferase 5Aa | −1.21 | 2.90E−02 |
| mbd2 | Methyl-CpG-binding domain protein 2 | 1.26 | 2.65E−02 |
| mbd5 | Methyl-CpG-binding domain protein 5 | −1.33 | 2.79E−02 |
| men1 | Multiple endocrine neoplasia I | −1.20 | 2.87E−03 |
| phc2b | Polyhomeotic homolog 2b (Drosophila) | −1.37 | 1.81E−03 |
| phf21ab | PHD finger protein 21Ab | −1.27 | 3.41E−02 |
| ruvbl1 | RuvB-like AAA ATPase 1 | 1.29 | 8.25E−03 |
| setd5 | SET domain containing 5 | −1.32 | 2.09E−04 |
| sf3b3 | Splicing factor 3b, subunit 3 | 1.20 | 2.20E−02 |
| smyd1b | SET and MYND domain containing 1b | −1.53 | 1.39E−02 |
| smyd2b | SET and MYND domain containing 2b | −1.25 | 3.17E−02 |
| wdr61 | WD repeat domain 61 | 1.3 | 1.96E−03 |