Table 1.

Reference complete genome sequences for HEV subtypes (bold – additions and alterations since 2016)

Subtype	Accession	Strain	Geographical origin*	Host*	Comments
1a	M73218	Burma	India, Pakistan, UK, Myanmar	Human
1b	L08816	Xinjiang	China, Pakistan	Human	Replaces D11092
1c	X98292	I1	India	Human
1d	AY230202	Morocco	Morocco	Human
1e	AY204877	T3	Chad	Human
1f	JF443721	IND-HEV- AVH5-2010	Bangladesh, India, UK	Human
1g	LC225387	MNE15-072	India, Mongolia, Pakistan Japan, UK, France	Human
1	FJ457024	HEV-H	India	Human
1	MH918640	NG/17–0503	Nigeria	Human
2a	KX578717	Mex-14	Mexico	Human	Replaces M74506
2b	(MH809516)	(NG/17–0500)	Nigeria	Human	(Provisional)
3a	AF082843	Meng	Japan, USA, South Korea, UK, Germany, Canada, Singapore, China, Mexico, Thailand	Human, pig, mongoose
3b	AP003430	JRA1	Japan, China, Canada	Human, pig, wild boar, deer, mongoose
3c	FJ705359	wbGER27	France, Germany, Netherlands, Sweden, UK, Thailand, Canada	Human, wild boar
3d					AF296165-7 (ORF2)
3e	AB248521	swJ8-5	France, Germany, Hungary, Italy, UK, Japan	Human, pig, wild boar, Maccaca sp. monkey†
3f	AB369687	E116-YKH98C	France, Germany, UK, Sweden, Denmark, Spain, Thailand, Japan, Singapore	Human, pig, wild boar	Includes EU723513, EU360977 and KJ873911
3g	AF455784	Osh 205	Kyrgyzstan	Pig†
3h	JQ013794	TR19	France, Switzerland, Mongolia	Human, pig
3i	FJ998008	BB02	Sweden, Germany	Human, wild boar
3j	AY115488	Arkell	Canada	Pig	From pooled material
3k	AB369689	E088-STM04C	Japan	Human, pig
3l	JQ953664	FR-SHEV3c-like	Italy, France	Pig, human
3m	KU513561	IC2011	France, Spain	Human
3	AB290313	swMN06-C1056	Mongolia	Pig
3	MF959765	WB/HEV/ NA21ITA15	Italy	Wild boar
3	LC260517	swHE1606845	Japan	Pig
3	MK390971	17RS1920	Italy	Wild boar
3	MF959764	WB/HEV/ NA17ITA15	Italy	Wild boar
3	KP294371	MWP_2010	Germany	Wild boar
3ra	FJ906895	GDC9	France, Germany, China, South Korea, USA	Rabbit, hare, human	Diverse clade
4a	AB197673	JKO-ChiSai98C	China, Mongolia, Taiwan, South Korea	Pig, human
4b	DQ279091	swDQ	Taiwan, China, Cambodia, Japan	Pig, human, Rhesus monkey	Three subclades
4c	AB074915	JAK-Sai	Japan	Human, pig	Three subclades
4d	AJ272108	T1	China	Pig, human
4e	AY723745	IND-SW-00–01	India	Pig
4f	AB220974	HE-JA2	Japan	Human
4g	AB108537	CCC220	Japan, China	Human
4h	GU119961	CHN-XJ-SW13	China	Human, pig, cow, goat, yak
4i	AB369690	E067-SIJ05C	China, Japan	Pig, wild boar human	Replaces DQ450072
4	AB369688	E087-SAP04C	Japan†	Human
4	MK410048	SWU/42-5/2018	China	Pig
5a	AB573435	JBOAR135-Shiz09	Japan	Wild boar
6a	AB602441	wbJOY_06	Japan	Wild boar
6	AB856243	wbJNN_13	Japan	Wild boar
7a	KJ496143	178C	UAE	Camel	Dromedary camel
7	KJ496144	180C	UAE	Camel, human	Dromedary camel
8a	KX387865	12XJ	China	Camel	Bactrian camel
8	MH410174	BcHEV-GP	China	Camel	Bactrian camel

*Information for strains for which a complete coding region sequence is available.

†Geographical origin or host uncertain.