Table 2.
Genome characteristics of the Salinispora strains studied here and the Salinispora arenicola , Salinispora pacifica and Salinispora tropica type strains
|
Strain |
Genome size (Mb) |
No. of Contigs |
CDS |
G+C content (mol%) |
Sequencing depth |
N50 value |
Accession numbers |
Reference |
|---|---|---|---|---|---|---|---|---|
|
Salinispora arenicola CNH-643T |
6.61 |
85 |
5056 |
69.4 |
289× |
na |
[47] |
|
|
Salinispora tropica CNB-440T |
5.18 |
1 |
4664 |
69.5 |
na |
5 183 331 |
[30] |
|
|
Salinispora pacifica CNR-114T |
5.87 |
101 |
5521 |
69.7 |
na |
137 332 |
[18] |
|
|
CNT-138T |
5.45 |
15 |
4981 |
69.7 |
na |
1 212 913 |
[18] |
|
|
CNT-029 |
5.24 |
45 |
4847 |
69.7 |
na |
326 700 |
[18] |
|
|
CNT-148T |
5.10 |
10 |
4888 |
69.9 |
na |
1 829 387 |
[18] |
|
|
CNS-801 |
4.97 |
39 |
4668 |
69.9 |
321× |
na |
jgi_2561511036 |
[18] |
|
CNT-150T |
5.20 |
37 |
5060 |
69.3 |
na |
512 538 |
NZ_AQZW0000000 |
[18] |
|
CNS-237 |
5.24 |
77 |
4865 |
69.4 |
na |
235 599 |
[18] |
|
|
CNT-569T |
5.23 |
48 |
4856 |
69.2 |
na |
229 397 |
[18] |
|
|
CNR-942 |
5.47 |
60 |
5086 |
69.1 |
na |
180 850 |
[18] |
|
|
CNY-202T |
5.18 |
204 |
5016 |
69.6 |
na |
70 206 |
[18] |
|
|
CNY-666T |
5.73 |
106 |
5323 |
70.0 |
287× |
na |
jgi_2563366532 |
[18] |
na, Not available.