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. 2020 Oct 30;11:546052. doi: 10.3389/fgene.2020.546052

TABLE 3.

Path analysis using the correlation data for 7,969 Brangus animals with two ancestral breeds (Angus and Brahman) as the reference and three SNP panels (1K, 5K, and 10K).

Statistics GGP30K/GGP 40K
GGP 50K
1K 5K 10K 1K 5K 10K
Correlation Brangus vs. Angus 0.699 0.671 0.692 0.714 0.689 0.711
Brangus vs. Brahman 0.442 0.451 0.475 0.444 0.456 0.481
Path coefficient Brangus < -Angus 0.668 0.645 0.654 0.678 0.663 0.673
Brangus < -Brahman 0.418 0.410 0.416 0.424 0.415 0.420
D-GBC Brangus < -Angus 71.9% 71.2% 71.2% 71.9% 71.8% 72.0%
Brangus < -Brahman 28.1% 28.8% 28.8% 28.1% 28.2% 28.0%
C-GBC Brangus < -Angus 71.2% 70.6% 70.2% 71.2% 71.1% 70.9%
Brangus < -Brahman 28.7% 29.3% 29.8% 28.7% 28.9% 29.1%

The Brangus animals were genotyped on either GGP 30K/GGP 40K bovine SNP chip or GGP 50K bovine SNP chip, respectively. The correlation of allele A frequencies between Angus (A) and Brahman (B) computed for the three SNP panels was rAB = 0.051 (1K), 0.062 (5K) and 0.090 (10K).