TABLE 6.
Path analysis using the correlation data for 7,605 Beefmaster animals with three ancestral breeds as the reference and three SNP panels.
| Statistics | GGP30K/GGP 40K |
GGP 50K |
|||||
| 1K | 5K | 10K | 1K | 5K | 10K | ||
| Correlation with Beefmaster | Brahman | 0.552 | 0.549 | 0.556 | 0.544 | 0.561 | 0.570 |
| Hereford | 0.511 | 0.504 | 0.504 | 0.549 | 0.548 | 0.543 | |
| Shorthorn | 0.485 | 0.443 | 0.483 | 0.558 | 0.477 | 0.520 | |
| Path coefficient | Brahman | 0.513 | 0.514 | 0.517 | 0.536 | 0.522 | 0.526 |
| Hereford | 0.375 | 0.381 | 0.371 | 0.420 | 0.417 | 0.398 | |
| Shorthorn | 0.275 | 0.263 | 0.276 | 0.310 | 0.282 | 0.298 | |
| D-GBC | Brahman | 54.9% | 55.2% | 55.6% | 51.3% | 51.9% | 52.8% |
| Hereford | 29.3% | 30.3% | 28.6% | 31.5% | 33.0% | 30.2% | |
| Shorthorn | 15.7% | 14.5% | 15.8% | 17.2% | 15.2% | 16.9% | |
| C-GBC | Brahman | 50.1% | 51.3% | 51.0% | 46.0% | 47.6% | 48.0% |
| Hereford | 31.1% | 31.5% | 29.8% | 33.4% | 34.1% | 31.4% | |
| Shorthorn | 18.8% | 17.3% | 19.2% | 20.6% | 18.3% | 20.6% | |
The Beefmaster animals were genotyped on either GGP 30K/GGP 40K bovine SNP chip or GGP 50K bovine SNP chip, respectively. Correlations of allele frequencies were 0.059 (1K), 0.045 (5K) and 0.035 (10K) between Brahman and Hereford, 0.052 (1K), 0.069 (5K) and 0.100 (10K) between Brahman and Shorthorn, and 0.460 (1K), 0.381 (5K) and 0.428 (10K) between Hereford and Shorthorn.