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. 2020 Oct 30;11:546052. doi: 10.3389/fgene.2020.546052

TABLE 6.

Path analysis using the correlation data for 7,605 Beefmaster animals with three ancestral breeds as the reference and three SNP panels.

Statistics GGP30K/GGP 40K
GGP 50K
1K 5K 10K 1K 5K 10K
Correlation with Beefmaster Brahman 0.552 0.549 0.556 0.544 0.561 0.570
Hereford 0.511 0.504 0.504 0.549 0.548 0.543
Shorthorn 0.485 0.443 0.483 0.558 0.477 0.520
Path coefficient Brahman 0.513 0.514 0.517 0.536 0.522 0.526
Hereford 0.375 0.381 0.371 0.420 0.417 0.398
Shorthorn 0.275 0.263 0.276 0.310 0.282 0.298
D-GBC Brahman 54.9% 55.2% 55.6% 51.3% 51.9% 52.8%
Hereford 29.3% 30.3% 28.6% 31.5% 33.0% 30.2%
Shorthorn 15.7% 14.5% 15.8% 17.2% 15.2% 16.9%
C-GBC Brahman 50.1% 51.3% 51.0% 46.0% 47.6% 48.0%
Hereford 31.1% 31.5% 29.8% 33.4% 34.1% 31.4%
Shorthorn 18.8% 17.3% 19.2% 20.6% 18.3% 20.6%

The Beefmaster animals were genotyped on either GGP 30K/GGP 40K bovine SNP chip or GGP 50K bovine SNP chip, respectively. Correlations of allele frequencies were 0.059 (1K), 0.045 (5K) and 0.035 (10K) between Brahman and Hereford, 0.052 (1K), 0.069 (5K) and 0.100 (10K) between Brahman and Shorthorn, and 0.460 (1K), 0.381 (5K) and 0.428 (10K) between Hereford and Shorthorn.