2CP	2-Cys peroxiredoxin
AA	arachidonic acid
ATCUN	Amino Terminal Copper and Nickel binding motif
AXP	total pool of ATP and ADP
benzylIMD	3-[substituted-benzyl]-menadiones
BSH	reduced bacillithiol
BSSB	oxidized bacillithiol
CFU	colony-forming unit
CNS	central nervous system
cp	circularly permuted
CQ	chloroquine
CuOOH	cumene hydroperoxide
DBMIB	2,5-dibromo-6-isopropyl-3-methyl-1,4-benzoquinone
DCMU	3-(3,4-dichlorophenyl)-1,1-dimethylurea
DPI	diphenyleneiodonium
dppf	1,1′-bis(diphenylphosphino) ferrocene
DPS	4,4′-dipyridyl disulfide
DR	diet-restricted
EB	elementary bodies
EBSH	bacillithiol redox potential
EGSH	glutathione redox potential
EMB	ethambutol
EMSH	mycothiol redox potential
ET(SH)2	trypanothione redox potential
ER	endoplasmic reticulum
ETC	electron transport chain
FD	ferredoxin
FF	fully fed
FLIM	fluorescence lifetime imaging
FNR	ferredoxin-NADP+ reductase
FP	fluorescent protein
FRET	Förster resonance energy transfer
FTR	(Fd)-dependent Trx reductase
G6PD	glucose-6-phosphate dehydrogenase
GEFIs	genetically encoded fluorescent indicators
GFP	green fluorescent protein
GR	glutathione reductase
Grx1	glutaredoxin 1
GSH	reduced glutathione
GSSG	oxidized glutathione
hpi	hours post infection
IFN	interferon
IMS	intermembrane space of mitochondria
INH	isoniazid
iNOS	inducible NO synthase
L	lineage
LPS	lipopolysaccharides
MetT	4-Methoxy-2,2,6,6-tetramethylpiperidine 1-oxyl
mlt	meltdown
MPO	myeloperoxidase
MSH	reduced mycothiol
Msm	Mycobacterium smegmatis
MSSM	oxidized mycothiol
Mtb	Mycobacterium tuberculosis
MTH1	mutT homologue
Myo	myosin
NCs	normal/long-sized cells
NOX	NADPH-oxidase
NTRC	NADPH-dependent thioredoxin reductase
OxyR-RD	regulatory domain of OxyR transcription factor
PI3K	phosphoinositide 3-kinase
PKC	protein kinase C
PLB	plumbagin
PNS	peripheral nervous system
PMA	phorbol 12-myristate 13-acetate
RACF	retrograde actin cable flow
RB	reticulate bodies
RBCs	red blood cells
RIF	rifampicin
RNS	reactive nitrogen species
roGFP	redox-sensitive green fluorescent protein
ROS	reactive oxygen species
rxRFP	redox sensitive red fluorescent protein
rxYFP	redox-sensitive yellow fluorescent protein
SCs	short-sized cells
SCV	Salmonella-containing vacuole
SEM	standard error of the mean
SHAM	salicylhydroxamic acid
sigH	SigmaH factor
SPI2	Salmonella pathogenicity island
SOD	superoxide dismutase
T3SS	type 3 secretion system
T-REX	Rex protein from Thermus aquaticus
T(SH)2	reduced trypanothione
Tpx	tryparedoxin
Trx	thioredoxin
TS2	oxidized trypanothione
UPR	unfolded protein response
WT	wild type
YFP	yellow fluorescent protein