Table 2.
The potential CD8+ T-cell epitopes along with their interacting MHC class I alleles and total processing score, epitopes conservancy_hits and pMHC-I immunogenicity score.
| Epitopes | NetCTL Combined Score |
Epitope Conservancy Hit (MAX. Identity %) |
MHC-I Interaction with an Affinity of IC50 < 200 and the Total Score (Proteasome Score, TAP Score, MHC-I Score, Processing Score) |
pMHC-I Immunogenicity Score |
|---|---|---|---|---|
| LSPRWYFYY | 2.3408 | 100 | HLA-A*29:02 (1.32), HLA-A*30:02 (0.8), HLA-A*01:01 (0.66), HLA-C*16:01 (0.26) |
0.35734 |
| NTASWFTAL | 0.9521 | 100 | HLA-A*68:02 (1.11), HLA-C*16:01 (0.18), HLA-C*03:03 (0.12), HLA-C*03:04 (0.12), HLA-C*12:03 (0.10), HLA-A*02:06 (0.04), HLA-C*03:02 (−0.07), HLA-A*26:01 (−0.13), HLA-C*14:02 (−0.34) |
0.22775 |
| DLSPRWYFY | 1.4994 | 100 | HLA-A*29:02 (0.99) | 0.25933 |
| SPDDQIGYY | 1.1404 | 100 | HLA-B*35:01 (0.52) | 0.06844 |
| SSPDDQIGY | 0.6895 | 100 | 0.0634 |