Table 3.
Imputed IL2RA genotypes and their significant associations with sIL-2R in plasma.
Chr | SNP | bp* | Intron/Exon | A1 | n | Beta (95% CI) | p-Value |
---|---|---|---|---|---|---|---|
10 | rs12722489 | 6102012 | Intron 1 | T | 330 | −0.28 (−0.39, −0.17) | 5.19 × 10−7 |
10 | rs12722517 | 6081040 | Intron 1 | C | 330 | −0.24 (−0.34, −0.14) | 2.23 × 10−6 |
10 | rs9663421 | 6055604 | Intron 7 | T | 330 | 0.25 (0.15, 0.35) | 3.17 × 10−6 |
10 | rs12722553 | 6071284 | Intron 1 | A | 330 | −0.26 (−0.37, −0.15) | 3.30 × 10−6 |
10 | rs12722551 | 6071379 | Intron 1 | T | 330 | −0.26 (−0.37, −0.15) | 3.30 × 10−6 |
10 | rs791593 | 6083292 | Intron 1 | G | 330 | −0.23 (−0.33, −0.14) | 4.22 × 10−6 |
10 | rs2104286 | 6099045 | Intron 1 | C | 330 | −0.24 (−0.33, −0.14) | 4.63 × 10−6 |
10 | rs41294713 | 6080354 | Intron 1 | C | 330 | −0.25 (−0.36, −0.15) | 5.23 × 10−6 |
10 | rs12722515 | 6081230 | Intron 1 | A | 330 | −0.25 (−0.36, −0.15) | 5.23 × 10−6 |
10 | rs791590 | 6090322 | Intron 1 | T | 330 | −0.25 (−0.36, −0.15) | 5.23 × 10−6 |
10 | rs2246031 | 6092210 | Intron 1 | T | 330 | −0.25 (−0.36, −0.15) | 5.23 × 10−6 |
10 | rs7078614 | 6075831 | Intron 1 | T | 330 | −0.21 (−0.30, −0.12) | 5.50 × 10−6 |
10 | rs7920946 | 6074634 | Intron 1 | C | 330 | −0.22 (−0.31, −0.13) | 5.53 × 10−6 |
10 | rs4625363 | 6072504 | Intron 1 | G | 330 | −0.25 (−0.36, −0.15) | 5.54 × 10−6 |
10 | rs12722527 | 6077328 | Intron 1 | T | 330 | −0.25 (−0.36, −0.15) | 5.54 × 10−6 |
10 | rs12722523 | 6078390 | Intron 1 | A | 330 | −0.25 (−0.36, −0.15) | 5.54 × 10−6 |
10 | rs12722561 | 6069893 | Intron 1 | T | 330 | −0.25 (−0.36, −0.15) | 6.22 × 10−6 |
10 | rs12722559 | 6070273 | Intron 1 | A | 330 | −0.25 (−0.36, −0.15) | 6.22 × 10−6 |
10 | rs12722606 | 6053133 | Exon 8 | A | 330 | 0.25 (0.14, 0.36) | 6.98 × 10−6 |
10 | rs11256335 | 6055222 | Intron 7 | A | 330 | 0.25 (0.14, 0.36) | 6.98 × 10−6 |
10 | rs12722605 | 6053163 | Exon 8 | A | 330 | 0.29 (0.17, 0.42) | 7.27 × 10−6 |
10 | rs12722497 | 6095928 | Intron 1 | A | 330 | 0.35 (0.20, 0.50) | 1.22 × 10−5 |
10 | rs11256464 | 6082558 | Intron 1 | T | 330 | 0.32 (0.18, 0.47) | 2.55 × 10−5 |
10 | rs11597237 | 6079017 | Intron 1 | T | 330 | −0.23 (−0.33, −0.12) | 3.07 × 10−5 |
10 | rs11256416 | 6075359 | Intron 1 | T | 330 | −0.21 (−0.31, −0.11) | 3.67 × 10−5 |
10 | rs7910961 | 6077796 | Intron 1 | T | 330 | 0.20 (0.11, 0.30) | 4.04 × 10−5 |
10 | rs4747837 | 6058735 | Intron 7 | G | 330 | −0.23 (−0.34, −0.12) | 4.34 × 10−5 |
10 | rs7900385 | 6062748 | Intron 4 | A | 330 | −0.23 (−0.34, −0.12) | 4.34 × 10−5 |
10 | rs12722588 | 6060433 | Intron 6 | T | 330 | −0.22 (−0.33, −0.11) | 5.83 × 10−5 |
10 | rs12722587 | 6060630 | Intron 6 | T | 330 | −0.22 (−0.33, −0.11) | 5.83 × 10−5 |
10 | rs7093069 | 6063319 | Intron 4 | T | 330 | −0.22 (−0.33, −0.11) | 5.83 × 10−5 |
10 | rs11816044 | 6074082 | Intron 1 | A | 330 | 0.20 (0.10, 0.30) | 8.91 × 10−5 |
10 | rs7100984 | 6078539 | Intron 1 | A | 330 | 0.20 (0.10, 0.30) | 9.07 × 10−5 |
10 | rs12722574 | 6066462 | Intron 2 | A | 330 | −0.20 (−0.29, −0.10) | 9.63 × 10−5 |
10 | rs4749894 | 6058323 | Intron 7 | G | 330 | 0.22 (0.11, 0.33) | 1.00 × 10−4 |
10 | rs4749924 | 6082396 | Intron 1 | C | 330 | 0.20 (0.10, 0.29) | 1.00 × 10−4 |
10 | rs6602398 | 6082953 | Intron 1 | T | 330 | 0.20 (0.10, 0.29) | 1.00 × 10−4 |
10 | rs7900744 | 6065611 | Intron 3 | G | 330 | −0.20 (−0.29, −0.10) | 1.19 × 10−4 |
10 | rs791588 | 6089342 | Intron 1 | G | 330 | 0.15 (0.06, 0.24) | 7.71 × 10−4 |
10 | rs11256342 | 6057231 | Intron 7 | G | 330 | 0.17 (.07, 0.26) | 8.37 × 10−4 |
10 | rs12253981 | 6092346 | Intron 1 | G | 330 | 0.16 (0.07, 0.25) | 8.84 × 10−4 |
10 | rs2025345 | 6067688 | Intron 2 | G | 330 | 0.16 (0.07, 0.26) | 9.75 × 10−4 |
10 | rs12358961 | 6066195 | Intron 3 | A | 330 | 0.16 (0.07, 0.26) | 1.03 × 10−3 |
10 | rs1924138 | 6096158 | Intron 1 | A | 330 | 0.16 (0.06, 0.25) | 1.06 × 10−3 |
10 | rs11256497 | 6087794 | Intron 1 | A | 330 | 0.15 (0.06, 0.25) | 1.36 × 10−3 |
10 | rs10795752 | 6072354 | Intron 1 | T | 330 | 0.15 (0.06, 0.25) | 1.51 × 10−3 |
10 | rs2245675 | 6095577 | Intron 1 | A | 330 | 0.16 (0.06, 0.25) | 1.55 × 10−3 |
10 | rs2256852 | 6096923 | Intron 1 | A | 330 | 0.16 (0.06, 0.25) | 1.55 × 10−3 |
10 | rs791587 | 6088699 | Intron 1 | A | 330 | 0.14 (0.05, 0.23) | 1.62 × 10−3 |
10 | rs12251836 | 6091281 | Intron 1 | A | 330 | 0.15 (0.06, 0.24) | 1.65 × 10−3 |
10 | rs6602368 | 6062915 | Intron 4 | C | 330 | 0.15 (0.06, 0.24) | 1.67 × 10−3 |
10 | rs2476491 | 6095410 | Intron 1 | T | 330 | 0.16 (0.06, 0.26) | 1.74 × 10−3 |
10 | rs4749926 | 6085312 | Intron 1 | A | 330 | 0.15 (0.05, 0.24) | 2.60 × 10−3 |
10 | rs11256457 | 6080794 | Intron 1 | G | 330 | 0.15 (0.05, 0.24) | 2.72 × 10−3 |
10 | rs10905641 | 6072293 | Intron 1 | C | 330 | 0.14 (0.05, 0.23) | 3.41 × 10−3 |
10 | rs6602379 | 6073374 | Intron 1 | G | 330 | 0.14 (0.05, 0.24) | 3.51 × 10−3 |
10 | rs809356 | 6091148 | Intron 1 | C | 330 | 0.13 (0.04, 0.22) | 3.60 × 10−3 |
10 | rs2256774 | 6097165 | Intron 1 | C | 330 | 0.14 (0.05, 0.23) | 3.87 × 10−3 |
10 | rs1323657 | 6072427 | Intron 1 | A | 330 | 0.13 (0.04, 0.23) | 3.95 × 10−3 |
10 | rs7072398 | 6079846 | Intron 1 | A | 330 | 0.13 (0.04. 0.22) | 5.33 × 10−3 |
10 | rs10795763 | 6096199 | Intron 1 | G | 330 | 0.13 (0.04. 0.22) | 5.34 × 10−3 |
10 | rs7917726 | 6096600 | Intron 1 | G | 330 | 0.13 (0.04. 0.22) | 5.34 × 10−3 |
10 | rs706779 | 6098824 | Intron 1 | C | 330 | 0.12 (0.03. 0.21) | 7.97 × 10−3 |
10 | rs10905656 | 6086093 | Intron 1 | A | 330 | 0.11 (0.02. 0.20) | 1.51 × 10−2 |
10 | rs3793713 | 6059704 | Intron 7 | G | 330 | 0.11 (0.01. 0.20) | 2.56 × 10−2 |
10 | rs4749920 | 6071453 | Intron 1 | C | 330 | 0.11 (0.01. 0.21) | 3.73 × 10−2 |
10 | rs4749921 | 6071654 | Intron 1 | C | 330 | 0.11 (0.01. 0.21) | 3.73 × 10−2 |
10 | rs4747845 | 6074441 | Intron 1 | A | 330 | 0.11 (0.01. 0.21) | 3.73 × 10−2 |
*SNP positions according to the Genome Reference Consortium Human Build 37 (GRch37).
Linear regression model: p-value = adjusted for age, sex and complication group. Chr, chromosome; SNP, single nucleotide polymorphism; bp, base pair; A1, minor allele; CI, confidence interval.