Table 2.
Effects of key residues and mutations on RBD–ACE2 interaction
Residue | ΔΔΔG (mean) | Mutation with maximum ΔΔΔG | Mutation with minimum ΔΔΔG | ||
---|---|---|---|---|---|
SARS-Cov-2 S RBD | |||||
G496 | 4.694 | G496W | 17.418 | G496P | −0.119 |
G502 | 2.922 | G502P | 11.767 | G502L | 1.601 |
G476 | 0.595 | G476D | 2.273 | G476F | 0.092 |
T500 | 0.299 | T500G | 1.209 | T500W | −0.459 |
Q498 | 0.181 | Q498D | 1.843 | Q498I | −1.845 |
V483 | 0.004 | V483D | 0.050 | 0.000 | |
F497 | −0.476 | F497G | 0.313 | F497W | −0.976 |
G504 | −0.245 | G504E | 0.416 | G504W | −0.752 |
Y495 | −0.209 | Y495G | 0.268 | Y495L | −1.184 |
N501 | −0.150 | N501Y | 4.550 | N501E | −2.490 |
L452 | −0.014 | L452D | 0.667 | L452R | −0.395 |
N343 | 0.000 | 0.002 | 0.000 | ||
Human ACE2 | |||||
D355 | 2.031 | D355Y | 7.284 | D355G | −0.382 |
D38 | 1.858 | D38G | 2.502 | D38N | 0.343 |
Q42 | 1.392 | Q42D | 1.748 | Q42R | 0.069 |
S19 | 0.678 | S19G | 1.119 | S19H | 0.101 |
G326 | 0.514 | G326Y | 6.967 | G326K | −1.108 |
Q24 | 0.308 | Q24Y | 3.353 | Q24L | −1.267 |
L45 | 0.287 | L45N | 0.670 | L45H | −0.541 |
Y41 | −0.742 | Y41W | 1.708 | Y41P | −1.808 |
K353 | −0.47 | K353I | 2.737 | K353F | −1.937 |
N330 | −0.44 | N330D | 0.471 | N330F | −1.326 |
E75 | −0.077 | E75D | −0.03 | E75K | −0.179 |
K26 | −0.052 | K26R | 0.021 | K26D | −0.251 |
Note: The residues with the largest or smallest ΔΔΔG means and mutations with the largest or smallest ΔΔΔG values in all predictions are shown as bold fonts.