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. 2020 Sep 12;140(6):863–879. doi: 10.1007/s00401-020-02224-9

Table 2.

List of 38 differentially methylated positions

Cpg loci Delta β Adjusted p value Chromosome Gene Feature
1 cg10636246 − 0.0405317 9.58 × 10–5 1 AIM2 TSS1500
2 cg02481950 0.01975019 0.00012239 16 METTL9 Body
3 cg14427590 0.02273577 0.0001344 17 IGR
4 cg05740793 0.04394973 0.0003859 11 IGR
5 cg13965201 0.0290582 0.00193489 1 IGR
6 cg21540367 0.00991642 0.0023237 7 LRCH4 Body
7 cg05001044 0.05331962 0.00236357 1 MIR1977 TSS1500
8 cg09048334 0.03476521 0.00272688 6 IGR
9 cg22519265 0.01080344 0.00394136 17 ATP2A3 3′UTR
10 cg02448796 0.03283323 0.00510789 1 KCNAB2 Body
11 cg17641710 0.0238572 0.00582785 3 GNAI2 Body
12 cg03819286 0.02679297 0.00622737 16 MGRN1 TSS1500
13 cg10855342 0.00640701 0.00634387 4 ALPK1 5′UTR
14 cg15197458 0.01401478 0.00792343 19 IGR
15 cg00832928 0.02884309 0.00838196 3 SELT Body
16 cg22688566 0.02832814 0.00925244 17 MYO18A Body
17 cg25966751 0.02254565 0.01015631 14 IGR
18 cg20056593 0.01654389 0.01723034 12 IGR
19 cg27229664 0.02206902 0.01770546 16 KIAA0513 5′UTR
20 cg22505006 0.02903491 0.02133475 1 ZBTB7B 5′UTR
21 cg05343106 0.02028 0.0229423 11 DNAJB13 TSS200
22 cg17714703 0.03310906 0.02311756 19 UHRF1 Body
23 cg07081759 0.0249997 0.02342596 10 FAM53B Body
24 cg13444131 0.00917468 0.0237334 19 DYRK1B 5′UTR
25 cg22434506 0.00961761 0.02800703 12 IFFO1 Body
26 cg17515347 − 0.0473728 0.02813301 1 AIM2 TSS1500
27 cg20003976 0.01435695 0.02817662 1 ACADM TSS1500
28 cg09007354 0.0237598 0.03272807 1 GLIS1 5′UTR
29 cg20285559 0.01014608 0.03348693 1 THAP3 Body
30 cg19769147 0.01949328 0.03474175 14 PACS2 Body
31 cg24843003 0.02944661 0.03518602 19 DAZAP1 Body
32 cg03393322 0.0084795 0.03783743 7 SDK1 Body
33 cg04757081 0.01403053 0.03821293 10 IGR
34 cg01084918 0.02041746 0.03843211 1 FAM40A TSS1500
35 cg01101459 0.02894185 0.04051284 1 IGR
36 cg03546163 − 0.0535485 0.04329215 6 FKBP5 5′UTR
37 cg21393135 0.00327746 0.04491255 6 VARS Body
38 cg21155515 − 0.0075201 0.04995584 17 CANT1 1stExon

TSS 1500 located 200-1500 nucleotides upstream transcriptional start site, TSS 200 located 0-200 nucleotides upstream transcriptional start site, Body body of the gene, IGR intergenic regions, 5′UTR and 3′UTR are, respectively, 5′ and 3′ untranslated regions