Table 3.
PMWEnrich motifs
Rank | Target | id | Raw Score | p value |
---|---|---|---|---|
1 | GLTPD1 | MGC10334 | 1.927 | 1.55e−05 |
2 | DBP | M5338_1.02 | 1.37 | 2.63e−05 |
3 | UW.Motif.0555 | UW.Motif.0555 | 7.02 | 0.0001 |
4 | DIABLO | DIABLO | 2.46 | 0.0002 |
5 | EBF1 | M5364_1.02 | 1.43 | 0.0002 |
6 | ATF3 | M4683_1.02 | 5.54 | 0.0002 |
7 | UW.Motif.0654 | UW.Motif.0654 | 5.43 | 0.0002 |
8 | UW.Motif.0283 | UW.Motif.0283 | 15.02 | 0.0002 |
9 | CERS4 | LASS4 | 1.34 | 0.0003 |
10 | GOT1 | GOT1 | 1.14 | 0.0003 |
Top ten most significant position weight matrix (PWM) motifs found enriched in the 38 DMPs. The first column is the rank, the second shows the target name, and the next column is the motif ID. This ID comes from the MotifDb package and can be used to look up further information about the motif. The fifth column gives the estimated p value