Table 3.
Function enrichment analysis for the DEGs in the PPI network.
| Category | Term | p value | Genes |
|---|---|---|---|
| GOTERM_BP_FAT | GO:0000280 ~ nuclear division | 2.58E-04 | KIF11, PLK1, KIF15, BUB1, NDC80, AURKB, CDCA5 |
| GOTERM_BP_FAT | GO:0007067 ~ mitosis | 2.58E-04 | KIF11, PLK1, KIF15, BUB1, NDC80, AURKB, CDCA5 |
| GOTERM_BP_FAT | GO:0000087 ~ M phase of mitotic cell cycle | 2.84E-04 | KIF11, PLK1, KIF15, BUB1, NDC80, AURKB, CDCA5 |
| GOTERM_BP_FAT | GO:0048285 ~ organelle fission | 3.20E-04 | KIF11, PLK1, KIF15, BUB1, NDC80, AURKB, CDCA5 |
| GOTERM_BP_FAT | GO:0000278 ~ mitotic cell cycle | 7.09E-04 | KIF11, PLK1, KIF15, BUB1, NDC80, AURKB, CDCA5, GTSE1 |
| GOTERM_BP_FAT | GO:0001775 ~ cell activation | 1.05E-03 | PREX1, PLCG2, TLR1, IRF1, NFAM1, LTB, ICOSLG |
| GOTERM_BP_FAT | GO:0022403 ~ cell cycle phase | 1.36E-03 | KIF11, PLK1, KIF15, BUB1, NDC80, AURKB, CDCA5, GTSE1 |
| GOTERM_BP_FAT | GO:0006955 ~ immune response | 1.71E-03 | OSM, POU2AF1, CST7, ENPP3, PLCG2, TLR1, CD300LF, CCL5, LTB, ICOSLG |
| GOTERM_BP_FAT | GO:0000279 ~ M phase | 2.10E-03 | KIF11, PLK1, KIF15, BUB1, NDC80, AURKB, CDCA5 |
| GOTERM_BP_FAT | GO:0045321 ~ leukocyte activation | 2.95E-03 | PREX1, PLCG2, TLR1, IRF1, NFAM1, ICOSLG |
| GOTERM_BP_FAT | GO:0051056 ~ regulation of small GTPase-mediated signal transduction | 3.51E-03 | PLEKHG3, TBC1D10C, GMIP, PREX1, RASAL3, ARHGAP27 |
| GOTERM_BP_FAT | GO:0007017 ~ microtubule-based process | 3.57E-03 | KIF4A, KIF11, KIF15, NDC80, GTSE1, KIF20A |
| GOTERM_BP_FAT | GO:0051301 ~ cell division | 6.81E-03 | KIF11, PLK1, BUB1, NDC80, AURKB, CDCA5 |
| GOTERM_BP_FAT | GO:0022402 ~ cell cycle process | 7.62E-03 | KIF11, PLK1, KIF15, BUB1, NDC80, AURKB, CDCA5, GTSE1 |
| GOTERM_BP_FAT | GO:0046578 ~ regulation of Ras protein signal transduction | 1.04E-02 | PLEKHG3, TBC1D10C, GMIP, PREX1, ARHGAP27 |
| GOTERM_BP_FAT | GO:0007049 ~ cell cycle | 1.26E-02 | TXNIP, KIF11, PLK1, KIF15, BUB1, NDC80, AURKB, CDCA5, GTSE1 |
| GOTERM_BP_FAT | GO:0007242 ~ intracellular signaling cascade | 2.84E-02 | OSM, GMIP, PREX1, PLCG2, TLR1, PPM1L, NDC80, NFAM1, GRAP2, LTB, GTSE1 |
| GOTERM_BP_FAT | GO:0006952 ~ defense response | 3.79E-02 | AOX1, TLR1, MNDA, NFAM1, CCL5, MX2, ICOSLG |
| KEGG_pathway | hsa00760: nicotinate and nicotinamide metabolism | 5.08E-03 | ENPP3, AOX1, QPRT |
| KEGG_pathway | hsa05120: epithelial cell signaling in Helicobacter pylori infection | 3.72E-02 | PLCG2, MAP3K14, CCL5 |
DEGs: differentially expressed genes; PPI: protein-protein interaction; GO: Gene Ontology; KEGG:, Kyoto Encyclopedia of Genes and Genomes.