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. 2020 Oct;9(5):1813–1826. doi: 10.21037/gs-20-356

Table 1. Characteristics of included studies.

Ref. no Author/year/country Sample Detection method No. with a mutation/total no.
RAS PAX8/PPARγ NRAS HRAS KRAS Any RAS PAX8/PPARγ
(6) Fukahori/2012/Japan FFPE DS, Others 23/58 5/58 5/58 33/58
(10) Vuong/2016/Japan and Vietnam FFPE DS 17/51, 4/23 0/51, 0/23 0/51, 0/23 17/51, 4/23
(16) Hibi/2004/Japan FFPE, Frozen RT-PCR, FISH 0/6
(17) Mochizuki/2015/Japan FFPE RT-PCR 1/21
(21) Bandoh/2018/Japan FFPE NGS 0/9 0/9 0/9
(22) Fukushima/2003/Japan ND DS 4/8 0/8 0/8 4/8
(23) Kaihara/1994/Japan Frozen DS, others 2/7 2/7
(24) Oishi/2016/Japan FFPE DS, others 9/35 9/35
(25) Oyama/1995/Japan FFPE DS 3/6 0/6 3/6
(26) Vuong/2017/Japan FFPE DS RT-PCR 5/41 0/41 0/41 5/41 0/39
(5) Yoo/2016/Korea Frozen NGS NGS 6/27 6/27 3/27 15/27 1/27
(27) Bae/2014/Korea FFPE PS 2/13 2/13
(28) Kim/2012/Korea FFPE DS FISH 8/37 2/37 1/37 11/37 3/31
(29) Jang/2016/Korea FFPE DS 5/10 5/10
(30) Jeong/2015/Korea FFPE PS 8/39 4/39 9/39 21/39
(31) Jung/2018/Korea FFPE DS 9/40 7/40 2/40 18/40
(32) Jung/2016/Korea Frozen NGS 4/13 1/13 0/13 5/13
(33) Song/2017/Korea FFPE DS FISH 14/67 1/67 1/67 16/67 1/48
(34) Duan/2019/China FFPE NGS NGS 10/53 4/53 3/53 17/53 1/53
(35) Chia/2010/Malaysia FFPE FISH 2/18
(36) Liu/2004/Taiwan Frozen DS 1/8 1/8 1/8 3/8
(37) Khan/2013/India Frozen DS 0/8 0/8 0/8 0/8
(38) Schulten/2013/Saudi Arabia FFPE, Frozen DS 1/10 1/10 0/10 2/10
(39) Bouras/1998/France Frozen Others 1/6 0/6 0/6 1/6
(40) Bouras/1995/France Frozen Others 0/5 0/5
(41) Cristofaro/2006/France Frozen DS RT-PCR 8/21 8/21 9/21
(42) Lacroix/2005/France Frozen RT-PCR 4/23
(43) Eszlinger/2017/Germany FNA PS qPCR 1/12 0/12 0/12 1/12 0/12
(44) Klemke/2012/Germany FFPE RT-PCR, FISH 2/21
(45) Karger/2005/Germany Frozen qPCR 0/7
(46) Basolo/2000/Italy FFPE Others 2/5 2/5
(47) Censi/2017/Italy FNA DS 3/29 1/29 0/29 4/29
(48) Eszlinger/2015/Italy FNA PS 7/21 3/21 0/21 10/21
(49) Guerra/2014/Italy FNA PS 5/21 3/21 8/21
(50) Manenti/1994/Italy FFPE, Frozen DS, others 2/21 3/21 0/21 5/21
(51) Poma/2018/Italy FFPE DS RT-PCR 5/20 0/20 1/20 6/20 1/20
(52) Proietti/2013/Italy FFPE DS qPCR 10/29 1/29 1/29 12/29 1/29
(53) Banito/2007/Portugal FFPE, Frozen DS qPCR, FISH 2/25 1/25 0/25 3/25 7/17
(54) Marques/2004/Portugal Frozen qPCR, FISH 6/24
(55) Borowczyk/2019/Poland FFPE NGS 2/35 6/35 0/35 8/35
(56) Swierniak/2016/Poland Frozen NGS NGS 0/20 0/20 2/20 2/20 0/20
(57) Esapa/1999/UK FFPE, Frozen DS, others 4/9 0/9 0/9 4/9
(58) Lemoine/1989/UK FFPE Others 1/10 3/10 0/10 4/10
(59) Capella/1996/Spain FFPE Others 2/10 0/10 0/10 2/10
(60) Duman/2014/Turkey FFPE NGS 0/13 0/13
(61) Sahpaz/2015/Turkey FFPE qPCR 3/9
(62) Pauzar/2012/Croatia FFPE RT-PCR 7/18
(63) Eszlinger/2014/Denmark FFPE, FNA qPCR qPCR 3/24 1/24 0/24 4/24 3/24
(64) Ferraz/2012/Denmark FFPE, FNA qPCR 4/20
(11) Shi/1991/Hungary and Canada FFPE Others 1/6, 0/10 2/6, 1/10 0/6, 0/10 3/6, 1/10
(65) Celestino/2012/Norway FFPE, Frozen DS RT-PCR, FISH 2/7 1/7 3/7 0/7
(66) Dwight/2003/Sweden Frozen RT-PCR, FISH 10/34
(15) Boos/2013/Switzerland FFPE FISH 5/31
(67) Apple/1998/USA FFPE Others 0/10 0/10
(68) Giordano/2014/USA FFPE Others 3/17 5/17
(69) Karga/1991/USA FFPE Others 2/14 0/14 0/14 2/14
(70) Liu/2008/USA FFPE DS 13/64
(71) Mostoufi/2018/USA FFPE Others 0/6 1/6 1/6 2/6 0/6
(72) Nikiforov/2011/USA FNA NGS 4/11 1/11
(73) Nikiforov/2009/USA FNA DS RT-PCR 2/6 1/6
(74) Nikiforova/2003/USA FFPE, Frozen Others RT-PCR, FISH 14/33 3/33 0/33 17/33 13/33
(75) Nikiforova/2013/USA FFPE, Frozen NGS 9/18 0/18 1/18 10/18
(76) Nikita/2016/USA FFPE DS RT-PCR 1/5 0/5 0/5 1/5 1/5
(77) Yip/2015/USA FNA NGS NGS 3/10 0/10
(78) Aldred/2003/USA ND RT-PCR 2/19
(79) Algeciras/2010/USA FFPE RT-PCR 13/21
(80) Giordano/2006/USA FFPE RT-PCR 7/13
(81) Kroll/2000/USA ND RT-PCR 5/8
(82) Cerutti/2004/Brazil FFPE RT-PCR 4/13
(83) Mond/2014/Australia FFPE, Frozen DS RT-PCR 5/27 3/27 0/27 8/27 1/9
(84) Cheung/2003/Australia Frozen RT-PCR 6/13

FFPE, formalin-fixed paraffin-embedded; FNA, fine needle aspiration; NGS, next generation sequencing; DS, direct sequencing; PS, pyrosequencing; RT-PCR, reverse transcription PCR; qPCR, quantitative PCR; FISH, fluorescence in situ hybridization.