Table 2.
Statistics of the transcriptome sequencing and quality check
| Samples | Raw_reads | Clean_reads | Clean_bases (Gb) | Error (%) | Q20 (%) | Q30 (%) | GC (%) |
|---|---|---|---|---|---|---|---|
| CK01 | 50,686,474 | 50,295,380 | 6.99 | 0.02 | 97.87 | 93.76 | 47.07 |
| CK02 | 50,394,888 | 50,015,274 | 6.94 | 0.02 | 97.95 | 93.92 | 47.14 |
| CK03 | 61,303,972 | 60,958,750 | 8.43 | 0.029 | 97.99 | 94.03 | 47.34 |
| CK041 | 50,440,018 | 50,157,384 | 6.86 | 0.029 | 97.96 | 94 | 47.7 |
| CK042 | 57,788,340 | 57,453,616 | 7.9 | 0.029 | 97.87 | 93.75 | 47.58 |
| CK043 | 58,747,552 | 58,404,162 | 8.02 | 0.029 | 97.87 | 93.76 | 47.68 |
| SL01 | 57,381,552 | 57,042,586 | 7.8 | 0.029 | 97.99 | 94.08 | 47.95 |
| SL02 | 63,618,448 | 63,275,858 | 8.73 | 0.029 | 97.95 | 93.96 | 47.37 |
| SL03 | 59,962,230 | 59,628,096 | 8.24 | 0.029 | 97.96 | 93.93 | 47.35 |
| SL041 | 43,256,016 | 42,968,462 | 5.96 | 0.029 | 97.84 | 93.67 | 46.98 |
| SL042 | 46,580,296 | 46,369,104 | 6.43 | 0.02 | 98.15 | 94.34 | 47.03 |
| SL043 | 50,559,704 | 50,299,706 | 6.98 | 0.02 | 98.06 | 94.19 | 47.03 |