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. Author manuscript; available in PMC: 2021 May 1.
Published in final edited form as: J Comput Aided Mol Des. 2020 Jan 20;34(5):543–560. doi: 10.1007/s10822-019-00267-z

Table 1:

Hydration free energies, chemical potentials and octanol-water partition coefficients for all octanol parameters were calculated and compared with experimental values.

Parametrization ΔGw (kcal/mol) Δa μb (kcal/mol) Δa log Pow Δa
GAFF −2.62(5) 1.47(60) −7.63(16) 0.50(16) 3.65(12) 0.73(15)
OPLS-AA −3.26(5) 0.83(60) −8.59(16) −0.46(16) 3.89(13) 0.97(16)
CGenFF −3.82(5) 0.27(60) −8.98(19) −0.85(19) 3.76(15) 0.84(17)
Expc −4.09(60) −8.13 2.92(9)
a

The difference Δ (Eq. 8a) between experimental and computed hydration free energies, chemical potentials and octanol-water partition coefficients is shown for each octanol parametrization. The standard error of the mean in the last significant digits is given in parentheses (Eq. 8b).

b

The chemical potential of octanol μ is the transfer free energy of an octanol molecule from vacuum to the pure octanol solvent ΔGo.

c

Experimental log Powvalues were retrieved from REAXYS (https://www.reaxys.com). Multiple values were averaged and errors were taken as the standard deviation of the mean. The experimental octanol chemical potential μ (no reported uncertainty) and hydration free energy ΔGw were retrieved from the Minnesota Solvation Database (https://comp.chem.umn.edu/mnsol/); the latter agrees with the value from the FreeSolv database (DOI 10.5281/zenodo.1161245).