Table 4:
Computed (log Pow) and experimental octanol-water partition coefficients with error estimate for the OPLS-AA (mol2ff) results processed with alchemlyb-MBAR. The same raw data processed with mdpow-TI (Simpson’s rule) were submitted as entries cp8kv (Protocol Dry) and 623c0 (Protocol Wet), see Table S4 in the Supplementary Information
id | Exp. | Dry Octanol | Wet Octanol | ||
---|---|---|---|---|---|
log Pow | Δa | log Pow | Δa | ||
SM02 | 4.09(3) | 5.46(21) | 1.37(21) | 5.93(16) | 1.84(16) |
SM04 | 3.98(3) | 6.12(13) | 2.14(13) | 7.31(14) | 3.33(14) |
SM07 | 3.21(4) | 5.34(14) | 2.13(14) | 4.97(13) | 1.76(13) |
SM08 | 3.1(3) | 8.54(20) | 5.44(20) | 7.18(20) | 4.08(20) |
SM09 | 3.03(7) | 5.4(16) | 2.37(17) | 4.82(20) | 1.79(21) |
SM11 | 2.1(4) | 4.99(15) | 2.89(15) | 5.06(13) | 2.96(13) |
SM12 | 3.83(3) | 6.35(17) | 2.52(17) | 5.77(21) | 1.94(21) |
SM13 | 2.92(4) | 5.24(18) | 2.32(18) | 5.11(18) | 2.19(18) |
SM14 | 1.95(3) | 4.53(12) | 2.58(12) | 4.99(12) | 3.04(12) |
SM15 | 3.07(3) | 5.73(14) | 2.66(14) | 5.3(15) | 2.23(15) |
SM16 | 2.62(1) | 4.93(23) | 2.31(23) | 6.18(19) | 3.56(19) |
RMS Error (RMSE)b | 2.79(5) | 2.72(5) | |||
Absolute Unsigned Error (AUE) | 2.61(5) | 2.61(5) | |||
Mean Error (ME) | 2.61(5) | 2.61(5) |