Table 4.
GT RT-qPCR test kit formulation
Component | Stock | Volume (μl) | Final concentration |
---|---|---|---|
Template | Quantitative Synthetic SARS-CoV-2 RNA: ORF, E, N (ATCC® VR-3276SD™) | 0.5–5 | 5–50,000 copies |
Full-length viral RNA + HEK293T total RNA | 5 | 5–50,000 copies viral RNA + 0.02-200 ng of HEK293T total RNA | |
Primer/probe: | GT singleplex or multiplex primer/probe mix | 1.5 | 500 nm primers, 125 nm probes |
GT-Master Mix1 | 5× buffer: 250 mm Tris, pH 8.3, 375 mm KCl, 15 mm MgCl2, 47.5% trehalose |
4.0 | 1× buffer: 50 mm Tris, pH 8.3, 75 mm KCl, 3 mm MgCl2, 9.5% trehalose |
10 mm dNTP | 0.8 | 400 µm | |
100 mm DTT | 1.0 | 5 mm | |
GT-rRI2 | 1.0 | 50 µg/ml | |
GT-His-Taq2 | 1.0 | 7.5 µg/ml | |
GT-MMLV2 | 0.5 | 3.3 µg/ml | |
20 mg/ml BSA | 1.0 | 1 mg/ml | |
25 µM ROX | 0.4 | 500 nm | |
Water | Molecular biology grade water | ||
Total volume | 20 |
1This can be prepared as a 2× master mix and stored at −20 °C.
2See “Experimental procedures.” Concentration or volume should be adjusted for activity.