Table 2. Characteristics of cytokine primers developed in the study for ddPCR for IL-4 and IFNγ in N. cinerea.
Gene name | Primer sequences (5′->3′) | Probe fluorophore | Annealing/Extension (°C, s) | Optimal primer/probe concentration (nM) | Amplicon size (Bp) |
---|---|---|---|---|---|
IL-4 | F: TCACCTCCCAACTGATTCCAA | 60, 20 | 400 | 132 | |
R: ACGAGTCGTTTCTCGCTGT | 60, 20 | 400 | |||
P: GCACTCACCAGCACCTTTGTCCA | FAM | 60, 20 | 100 | ||
IFNy | F: AGCTGATTCGAATTCCCGTGA | 58, 20 | 400 | 95 | |
R: TCTGACTCCTTTTCCGCTTCC | 58, 20 | 400 | |||
P: TGCAGGTCCAGCGCAAAGCGATA | FAM | 58, 20 | 100 |