Table 4.
Protein target | Compound | Binding energy [kcal/mol] | Interacting amino acid residues |
---|---|---|---|
S glycoprotein | Punicalin | −7.406 | Ser 371, Leu 368, Val 367 |
Punicalagin | −7.312 | Asn 343, Asn 370, Ser 371, Leu 335, Leu 368, Phe 342 | |
Lopinavir | −6.508 | Ala 363, Asp 364, Leu 335, Leu 368, Phe 374, Val 362 | |
Ellagic acid | −6.114 | Ala 372, Phe 377, Tyr 369 | |
Umifenovir | −5.821 | Cys 336, Leu 368, Phe 338, Phe 342, Val 362, Val 367 | |
Gallic acid | −4.808 | Phe 374, Tyr 369 | |
ACE2 | Lopinavir | −7.512 | Asn 290, Asp 367, Glu 406, Ile 291, Leu 370, Lys 441, Met 366, Thr 276, Thr 445 |
Punicalin | −7.353 | Asn 290, Asp 292, Asp 367, Lys 441, Ser 280 | |
Punicalagin | −7.144 | Asp 292, Lys 441, Phe 428, Pro 289 | |
Ellagic acid | −6.854 | Asp 292, Asp 367, Gln 442, Lys 441 | |
Umifenovir | −6.558 | Ala 413, Asp 367, Glu 406, Leu 370, Leu 410, Lys 441, Ser 409 | |
Gallic acid | −5.244 | Gln 442, Ile 291, Lys 441, Thr 445 | |
Furin | Punicalin | −9.725 | Asp 258, Glu 257, Gly 255, His 194, Pro 256, Ser 368, Thr 365 |
Punicalagin | −9.385 | Arg 298, Asp 259, Gly 366, His 194 | |
Ellagic acid | −7.801 | Ala 532, Arg 490, Gly 307, Ser 311, Trp 531 | |
Gallic acid | −7.486 | Asp 258, Asp 301, Asp 306, Cys 303, Glu 257, Pro 256, Thr 262 | |
Sulconazole | −6.923 | Ala 532, Phe 528, Trp 531, Val 263 | |
TMPRSS2 | Punicalin | −8.168 | Arg 87, Arg 91, Arg 405, Asn 97, Met 404 |
Punicalagin | −7.358 | Arg 87, Arg 91, Arg 405, Asn 97, Gly 408, Met 404 | |
Camostat | −7.069 | Arg 87, Arg 405, Asn 97, Met 404, Phe 99 | |
Ellagic acid | −6.829 | Arg 87, Arg 405 | |
Gallic acid | 5.709 | Ala 88, Arg 91, Asp 92, Asp 129, Tyr 401 |
ACE2- angiotensin converting enzyme 2; TMPRSS2 - transmembrane serine protease 2