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[Preprint]. 2020 Nov 6:10.26434/chemrxiv.13200227.v1. [Version 1] doi: 10.26434/chemrxiv.13200227

Table 1:

Calculated free energy difference ΔG0 in kJ/mol for the proton transfer reaction in Eq. 1 in the apo state and in the presence of inhibitor N3 and for the tautomerization reaction of His41 in the apo state. The standard error for the computed values is ≈6 kJ/mol and is obtained using three subtrajectories for each MD simulation. Details on the ΔG0 can be found in the SI.

ΔG0
(Cys145H + His41E ⇌ Cys145 + His41H+)apo 36
(Cys145H + His41D ⇌ Cys145 + His41H+)apo 31
(Cys145H + His41D ⇌ Cys145 + His41H+)N3 −2
(His41E ⇌ His41D)apo 5