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[Preprint]. 2020 Jul 29:10.26434/chemrxiv.12725465.v1. [Version 1] doi: 10.26434/chemrxiv.12725465

Table II.

List of proteins and binding sites used for ‘smaller database’ docking. PPI refers to a protein-protein interface. In some cases, FTMap was used to identify potential binding sites (see SI Table II)

Receptor / Binding Site Receptor / Binding Site
MPro monomer / catalytic pocket NSP15 monomer / catalytic pocket
MPro dimer / PPI NSP15 dimer / PPI
NSP9 dimer / FTMap sites NSP10 monomer / PPI to NSP16
Nucleocapsid phosphoprotein / RNA binding site NSP16 monomer / PPI to NSP10
Nucleocapsid phosphoprotein / PPI NSP10:NSP16 / PPI
Nucleocapsid tetramer / FTMap sites NSP3 dimer / active site
NSP9 monomer / PPI