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. Author manuscript; available in PMC: 2021 Dec 1.
Published in final edited form as: Trends Pharmacol Sci. 2020 Nov 2;41(12):1038–1049. doi: 10.1016/j.tips.2020.10.005

Figure 3. Reactive Docking Pipeline.

Figure 3.

(Left) Scanning of all the solvent accessible residues and independent docking on each residue. (Right) Simulation of the reaction event: a custom soft potential is defined between the reactive atoms. If reactive atoms in docking results are found at appropriate bonding distance, the reaction is considered likely to occur