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. Author manuscript; available in PMC: 2020 Nov 17.
Published in final edited form as: J Mol Biol. 2015 Mar 24;427(10):1964–1976. doi: 10.1016/j.jmb.2015.03.012

Table 1.

Amino acid substitutions in the surface loops of OmpA.

OmpA variants


Loop number Residuea number E. coli amino acid S. flexneri amino acid No change in resistance Moderate effect Severe effect
1 25 N P A, R Eb
2 66 S D A, K
67 V N A, E, H, R
68 E I A, D, K, Q
3 108 S A E R
111 Y P A, E, R
“insertion” (113, 114, 115, 116) GASF ΔGASF
4 155 H N R A E

The amino acids differing between E. coli and S. flexneri OmpA flexible loops are organized by loop and residue number. The OmpA variants shown in Fig. 3 are summarized here by their loss of function to serve as a receptor to Sf6 based on their relative titer.

a

Residue numbering based on S. flexneri OmpA.

b

Variant did not grow on MacConkey agar.