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Fusion transcript detection in TGCTs. Overview of TGCT samples from TCGA (n = 150) that are positive for the fusion transcripts RCC1-ABHD12B (A) and CLEC6A-CLEC4D (B) among the four tools: ScaR, deFuse, FusionCatcher and Grep. Split read alignments of positive samples uniquely identified by ScaR are visualized using IGV. The ICD-O histology codes are shown as annotated by TCGA.
