Table 2.
Comparison of KAT and KAD
| Module | KAT | KAD | |
|---|---|---|---|
| K-mer spectrum | Yes | Yes | |
| Detection of GC bias in reads | Yes | No | |
| Quality assessment of read data | Yes | No | |
| Evaluation of assembly quality | Identification of error k-mers | Yes | Yes |
| Error position on an assembly | No | Yes | |
| Long assembly errors | Noa | Yes | |
| Comparison of two assemblies | No | Yes | |
aNot directly detected but might be visualized from the KAT output.