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. 2020 Nov 4;8:604793. doi: 10.3389/fbioe.2020.604793

TABLE 2.

Comparison of RT-qLAMP and RT-q(PCR-LAMP) assays.

SARS-CoV-2 RNA copies per reaction 5000 500 50 5 NTC
Tq (min) of qLAMP 27.51 ± 0.24 31.47 ± 3.72 NA NA NA
Tq (min) of q(PCR-LAMP); 1 cycle of PCR 21.30 ± 0.98 23.44 ± 4.27 28.44 ± 5.03 30.40 ± 3.39 NA
Tq (min) of q(PCR-LAMP); 2 cycles of PCR 19.88 ± 0.85 21.69 ± 1.72 25.83 ± 5.44 26.86 ± 6.17 NA
Tq (min) of q(PCR-LAMP); 4 cycles of PCR 18.10 ± 0.29 20.70 ± 0.89 23.31 ± 4.18 26.24 ± 5.06 NA
Tq (min) of q(PCR-LAMP); 6 cycles of PCR 15.56 ± 0.90 19.54 ± 0.67 20.81 ± 0.76 22.23 ± 0.93 NA

SARS-CoV-2 RNA was detected by RT-qLAMP and RT-q(PCR-LAMP) assays. The q(PCR-LAMP) amplifications were performed with 1, 2, 4, and 6 cycles of PCR. The table lists the mean quantification times (Tq) ± standard deviation of three replicates of the qLAMP and q(PCR-LAMP) reactions for the indicated RNA copy numbers. The assays were carried out with Reverase reverse-transcriptase and SD DNA polymerase using a series of SARS-CoV-2 RNA 10-fold dilutions from 5000 to 5 copies per reaction (NTC, no template control).