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. 2020 Nov 18;27:62. doi: 10.1051/parasite/2020058

Table 1.

Primer sequences and reaction conditions used in nested PCR amplifications.

Locus Primer sequences (5′ – 3′) Nucleotide fragment (bp) Annealing temperature (°C) Reference
Cryptosporidium spp. SSU rRNA SSU-F2: TTCTAGAGCTAATACATGCG ~1325 55 Xiao et al. [37]
SSU-R2: CCCATTTCCTTCGAAACAGGA
SSU-F3: GGAAGGGTTGTATTTATTAGATAAAG 826–864 55
SSU-R4: CTCATAAGGTGCTGAAGGAGTA
C. parvum gp60 AL3531: ATAGTCTCCGCTGTATTC 1280 52 Alves et al. [1]
AL3535: GGAAGGAACGATGTATCT
AL3532: TCCGCTGTATTCTCAGCC 800–850 50
AL3534: GCAGAGGAACCAGCATC
G. duodenalis SSU rRNA Gia2029: AAGTGTGGTGCAGACGGACTC 497 55 Appelbee et al. [2]
Gia2150c: CTGCTGCCGTCCTTGGATGT
RH11: CATCCGGTCGATCCTGCC 292 59
RH4: AGTCGAACCCTGATTCTCCGCCCAGG
G. duodenalis tpi AL3543: AAATIATGCCTGCTCGTCG 605 50 Cacciò and Ryan [4]
AL3546: CAAACCTTITCCGCAAACC
AL3544: CCCTTCATCGGIGGTAACTT 530 50
AL3545: GTGGCCACCACICCCGTGCC