. Author manuscript; available in PMC: 2020 Nov 18.

Published in final edited form as: Ann Appl Stat. 2019 Jun 17;13(2):1268–1294. doi: 10.1214/18-aoas1233

Table 1.

Comparison of samm, SHazaM, and penalized logistic regression given 2000 simulated B-cell receptor sequences from 4 mice. Relative θ error and Kendall’s tau computed separately for each of the 100 replicates. Monte Carlo standard errors calculated over these 100 estimates are given in parentheses.

Simulator	Model	Relative θ error	Kendall’s tau
survival model	samm	0.571 (0.002)	0.630 (0.001)
	SHazaM	0.731 (0.002)	0.507 (0.002)
	logistic	0.611 (0.002)	0.596 (0.001)
SHMulate	samm	0.478 (0.001)	0.689 (0.001)
	SHazaM	0.489 (0.001)	0.690 (0.001)
	logistic	0.499 (0.002)	0.677 (0.001)