Table 3.
Circulating Amino Acid Haplotypes Found at Residues 613–615 of the SARS-CoV-2 Spike Protein
| Haplotype Spike 613–615 | Number of Observed Genomes | Number of UK Clusters | Date of First and Last Sample |
|---|---|---|---|
| QGF | 3 | 2 | 2020-04-27, 2020-04-30 |
| HDV | 5 | 1 | 2020-03-30, 2020-03-30 |
| QNV | 7 | 2 | 2020-04-01, 2020-04-22 |
| QDI | 20 | 2 | 2020-03-17, 2020-04-15 |
| HGV | 24 | 3 | 2020-03-29, 2020-04-22 |
| QDV | 13356 | 2321 | 2020-01-29, 2020-06-03 |
| QGV | 43239 | 7007 | 2020-02-23, 2020-06-14 |
The ancestral haplotype is inferred to be QDV. The table reports the number of distinct UK clusters that the respective genomes are found in.