Table 1.
African swine fever virus (ASFV) isolates from Eastern and Southern Africa used for the construction of phylogenetic tree based on partial B646L (p72) gene nucleotide sequences.
| Isolate | Host species | Year of isolation | Location | Country | Accession number | p72 genotype | Reference |
|---|---|---|---|---|---|---|---|
| DRC/35/10/5 | Domestic pig | 2010 | NKa | DRCb | KX121552 | I | (30) |
| TAN/12/Iringa | Domestic pig | 2012 | Iringa | Tanzania | KF834193 | II | (31) |
| BOT/1/99 | Domestic pig | 1999 | NK | Botswana | AF504886 | III | (27) |
| RSA/1/99/W | NK | 1999 | NK | South Africa | AF449477 | IV | (27) |
| Tengani | Warthog | NK | Tengani | Malawi | AF301541 | V | (32) |
| SPEC265 | Domestic pig | 1994 | NK | Mozambique | AF270710 | VI | (32) |
| RSA/1/98 | NK | 1998 | NK | South Africa | AF302818 | VII | (27) |
| MOZ/1/98 | Domestic pig | 1998 | Tete | Mozambique | AF270705 | VIII | (27) |
| Ug12.Kabale1 | Domestic pig | 2012 | Kabale | Uganda | KC990890 | IX | (33) |
| BUR/18/Rutana | Domestic Pig | 2018 | Rutana | Burundi | MK829709 | X | This study |
| Kenya 1950 | Domestic pig | 1950 | NK | Kenya | AY261360 | X | (34) |
| TAN/Kwh12 | Warthog | 1968 | Kirawira | Tanzania | AF301546 | X | (27) |
| KAB 94/1 | Domestic pig | 1994 | NK | Kenya | AY972163 | X | (35) |
| KIRT/893 | Ticks | 1989 | Kirawira | Tanzania | AY351512 | X | (5) |
| TAN/16/Ngara | Domestic pig | 2016 | Ngara | Tanzania | MF437293 | X | (36) |
| TAN/15/Mwanza | Domestic pig | 2015 | Mwanza | Tanzania | MF437291 | X | (36) |
| BUR/1/84 | Domestic pig | 1984 | Gitega | Burundi | AF449463 | X | (27) |
| BUR/90/1 | Domestic pig | 1990 | Muyinga | Burundi | AF449472 | X | (5) |
| Ken05/Tk1 | Tick | 2005 | Kapiti plains | Kenya | NC_044945 | X | (34) |
| KAB/62 | Ticks | 1983 | Livingstone Game Park | Zambia | AY351522 | XI | (5) |
| MZI/921 | Domestic pig | 1992 | Mzinda | Malawi | AY351543 | XII | (5) |
| SUM/1411 | Ticks | Sumbu Park | Zambia | AY351542 | XIII | (5) | |
| DRC/35/10/3 | Domestic pig | 2010 | Ngaliema | DRC | KX121550 | XIV | (30) |
| TAN/08/Mazimbu | Domestic pig | 2008 | Mazimbu | Tanzania | GQ410765 | XV | (37) |
| TAN/2003/1 | Domestic pig | 2003 | Arusha | Tanzania | AY494550 | XVI | (5) |
| ZIM/92/1 | Domestic pig | 1992 | Gweru | Zimbabwe | DQ250119 | XVII | (38) |
| NAM/1/95 | NK | 1995 | Windhoek | Namibia | DQ250122 | XVIII | (38) |
| SPEC/251 | NK | 1996 | Ellisras | South Africa | DQ250118 | XIX | (38) |
| Lillie | Domestic pig | NK | NK | South Africa | DQ250109 | XX | (38) |
| RSA/1/96 | NK | 1996 | Gravelotte | South Africa | DQ250125 | XXI | (38) |
| SPEC/245 | NK | NK | Louis Trichardt | South Africa | DQ250117 | XXII | (38) |
| ETH/5a | Domestic pig | 2011 | Bahir Dar | Ethiopia | KT795361 | XXIII | (4) |
| MOZ_11/2006 | Tick | 2006 | Gorongosa National Park | Mozambique | KY353990 | XXIV | (6) |
a
Not known.
b
Democratic Republic of the Congo.