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. 2020 Nov 13:1–16. doi: 10.1080/07391102.2020.1846624

Figure 10.

Figure 10.

MM-PBSA Calculation of binding free energy.(A) The total binding free energy for all the Mpro and RdRp inhibitor complexes calculated for last 30 ns stable trajectory for a total of 150 frames, each at 200 ps interval. (B) Representative contributions of each energy component for binding free energy for Mpro and RdRp interactions with inhibitors. (C) The contribution of important binding residues of Mpro with Mulberroside E to the total binding free energy. (D) The contribution of important binding residues of RdRp with Emblicanin A to the total binding free energy. The (-ve) values indicate stable complex formation for PfCDPK2_inhibitor complexes, while the (+ve) values indicate a destabilizing effect.