Table 3. List of B. pseudomallei proteins homologous to previously reported DsbA substrates.
Accession Number (DsbA substrate) | Organism | Reference | B. pseudomallei homologue | Identity / coverage (%) | Protein function | Cys # |
---|---|---|---|---|---|---|
WP_059237834 | B. cepacia | [57] | WP_076835606.1 | 89 /100 | Sulfatase like hydrolase /transferase | 3 |
WP_006481898 | B. cenocepacia | [58, 59] | WP_139900467 | 87/100 | M4 family metallopeptidase | 4 |
gi|89255876 | F. tularensis | [43] | WP_050859308 | 24/92 | lytic transglycosylase | 3 |
gi|89255615 | F. tularensis | [43] | WP_080367462 | 40/51 | Pilin | 2 |
gi|89255615 | F. tularensis | [43] | WP_076953316 | 27/92 | Pilin | 2 |
gi|89256194 | F. tularensis | [43] | WP_041862011 | 30/83 | Molybdopterin synthase adenyl transferase (MoeB) | 13 |
gi|89256236 | F. tularensis | [43] | WP_064459078 | 34/53 | DNA/RNA endonuclease | 2 |
gi|89256237 | F. tularensis | [43] | WP_050772403 | 31/90 | PenI family β-lactamase | 4 |
gi|89256856 | F. tularensis | [43] | WP_044360358 | 21/80 | hypothetical protein | 4 |
gi|89256859 | F. tularensis | [43] | WP_058035453 | 39/80 | Polyamine ABC transporter substrate binding protein | 3 |
gi|89257049 | F. tularensis | [43] | WP_009915682 | 54/99 | Succinate dehydrogenase | 6 |
WP_001363619 | E. coli | [31] | WP_102811167 | 38/88 | Molecular chaperone | 3 |
AAC38377 | E. coli | [31] | WP_082252625 | 44/93 | T3SS outer membrane ring protein | 4 |
AAA24962 | Heamophilus Influenza | [31] | WP_053293022 | 47/92 | ABC transporter substrate binding protein | 4 |
CAA43967 | Yersinia pestis | [31] | WP_085538626 | 32/83 | Pilus assembly protein PapD | 2 |
The accession number of the known DsbA substrate (in an organism other than B. pseudomallei), the organism and the publication reference are given in the first three columns. The corresponding B. pseudomallei homologue is given in the fourth column. The identity and coverage (number of residues in the result sequence that overlap with the search sequence) is given in percent in the column “identity/coverage”. The final two columns provide the protein function and the number of cysteines in the predicted mature sequence. All proteins in this table are known or predicted to be secreted or periplasmic.