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. 2020 Oct 10;11(4):661–694. doi: 10.1007/s13167-020-00224-z

Table 4.

Kreb’s cycle involved mtDEPs operated in ovarian cancer biological system

Pathway code Accession no. Protein Unique peptides Coverage (%) PSMs Calc. pI MW (kDa) Ratio (T/N) p value (t test)
4.2.1.3 P21399 Aconitase 1 (ACO1) 10 13.27 13 6.7 98.34 0.65 6.04E-03
4.1.1.32 Q16822 PCK2 protein (PCK2) 1 35.00 31 7.6 70.68 2.18 4.48E-03
1.2.4.1 P11177 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial (PDHB) 14 52.92 79 6.7 39.21 1.51 3.25E-03
1.1.1.37 Q75MT9 Malate dehydrogenase (fragment) (MDH2) 21 74.37 262 8.3 33.21 1.71 5.51E-03
2.3.3.1 B4DJV2 Citrate synthase (CS) 13 26.93 73 7.9 50.40 1.59 4.65E-03
1.1.1.42 P48735 Isocitrate deh1ydrogenase (NADP), mitochondrial (IDH2) 27 56.64 355 8.7 50.88 2.02 2.07E-03
1.1.1.41 O43837 Isocitrate dehydrogenase (NAD) subunit beta, mitochondrial (IDH3B) 13 41.56 43 8.5 42.16 1.75 8.69E-03
1.1.1.41 P50213 Isocitrate dehydrogenase (NAD) subunit alpha, mitochondrial (IDH3A) 18 47.81 53 6.9 39.57 1.60 2.27E-02
4.2.1.2 P07954 Fumarate hydratase, mitochondrial (FH) 7 35.69 137 8.8 54.60 1.61 8.84E-03
6.2.1.4 Q96I99 Succinate–CoA ligase (GDP-forming) subunit beta, mitochondrial (SUCLG2) 19 44.91 115 6.4 46.48 1.71 8.17E-04
1.2.4.2 Q9ULD0 2-Oxoglutarate dehydrogenase-like, mitochondrial (OGDHL) 13 26.83 58 6.7 114.41 1.55 1.25E-03

Ratio (T/N) means the ratio of tumor to control

mtDEPs, mitochondrial differentially expressed proteins; pI, isoelectric point; MW, molecular weight; PSMs, peptide spectrum matches