Table 1.
S no. | Gene | rs ID | Allele |
P-Value |
Significant genetic models | ||
---|---|---|---|---|---|---|---|
HAPE-p vs HAPE-f | HAPE-p vs HL | HL vs HAPE-f | |||||
1 | AGT | rs69955 | A/G | 0.05 | – | – | Co-dominant and additive model |
rs476256 | G/A | – | 0.024 | 0.03 | Co-dominant and additive model | ||
2 | ACE | I/D20,50,53 | I/D | ≤0.05 | – | – | Co-dominant and additive model |
rs806611457 | C/G | 0.04; 0.03 | – | – | Additive model; Dominant model | ||
rs446114257 | T/C | 0.03 | – | – | Dominant model | ||
3 | AGTR1 | rs27565156 | T/A | 0.017 | – | – | Additive model |
rs27565256 | T/G | 0.016 | – | – | Additive model | ||
4. | CYP11B2 | –344T/C48 | T/C | – | – | <0.0001 | Additive model |
intron 2 conversion57 | intron 2 conversion | – | 0.03 | – | Co-dominant model | ||
5 | APLN | rs3761581 25 | T/G | 0.0027 | 3.9E-05 | – | Co-dominant and additive model |
rs223531225 | C/T | 1.0E-06 | 1.2E-06 | – | Co-dominant and additive model | ||
rs311575725 | C/G | 0.0032 | 0.04 | – | Co-dominant and additive model | ||
6 | APLNR | rs1154437425 | G/A | 0.004 | – | – | Co-dominant and additive model |
rs228262325 | A/G | 0.013 | 1.0E-07 | 4.5E-05 | Co-dominant and additive model | ||
7 | NOS3 | rs179998321,25,80 | G/T | 0.03 | 1.2E-05 | – | Co-dominant and additive model |
rs783025 | A/C | 1.6E-05 | 3.0E-06 | – | Co-dominant and additive model | ||
4b/4a21,25,80 | b/a | 0.0003 | 9.0E-07 | – | Co-dominant and additive model | ||
Gene |
rs ID |
Allele |
Minor allele predominance |
||||
8 | EPAS1 | rs56721780104 | G/C | Absence of minor allele C in other world population except Tibetans | |||
rs13419896105 | G/A | Predominance of A allele in Tibetans and Sherpas | |||||
rs149594770106 | T/A | Absence of minor allele A in other world population except Tibetans | |||||
9 | EGLN1 | rs186996510107 | G/C | Absence of minor allele C in other world population except Tibetans | |||
rs12097901107 | C/G | Absence of minor allele G in other world population except Tibetans | |||||
P-Value HAPE-p vs HAPE-f |
Significant genetic models | ||||||
rs153866445 | T/C | P < 0.008 | Co-dominant and additive model | ||||
rs47920045 | G/A/C | ||||||
rs248672945 | C/G/T | ||||||
rs279087945 | A/C | ||||||
rs48090245 | T/C | ||||||
rs248673645 | C/T | ||||||
rs97325245 | A/G |
HAPE-p: HAPE-patients; HAPE-f: HAPE-free controls; HL: high-landers.