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. 2020 Nov 24;70(1):29–49. doi: 10.1007/s00011-020-01425-y

Table 4.

Role of some external environmental stimuli in several inflammatory processes involving epigenetic regulation

Type of stimuli Dose/time Study model Epigenetic signatures Modification types Reference
Endocrine disrupting chemicals exposure
Mono-(2-ethylhexyl)phthalate 50 μM RAW 264.7 Cells SIRT activity and protein expression [117]
butyl benzyl phthalate 3 µg/ml murine transgenerational asthma model Global DNA methylation [118]
Bisphenol A

50 ng/kg diet

50 μg/kg diet

50 mg/kg diet

bone marrow-derived mast cells of adult mice Global DNA methylation [119]
Bisphenol A 0.5 mg/kg Sheep placentomes DNA methyltransferase 3 A and histone deacetylase 1 expressions [120]
Smoking
Cigarette smoke exposure 250 or 1000 ng/ml Lungs of C57Bl/6 mice Histone 3 and histone 4 acetylation [147]
Cigarette smoke exposure At least 5 cigarettes per day Human bronchoalveolar lavage cells 5hmC differentially methylated positions DMRs [148]
Cigarette smoke extract 1% and 2.5% Human macrophages HDAC activity and protein levels [149]
Environmental tobacco smoke 1.0 mg/m(3) Offspring of pregnant C57BL/6 mice Global and IL13 DNA methylation [150]
Cigarette smoke exposure Current smokers Human peripheral blood GPR15 methylation [151]
Cigarette smoke exposure Active smokers Human PBMCs AHRR and GPR15 gene methylation DMRs [152]
Excessive alcohol drinking
Alcohol dependence  ≥ 80 g of alcohol intake/day Human PBMCs HERC5 gene methylation [153]
Alcohol exposure  > 60 g/day Human hepatocytes miR-148a expression [155]
Acute alcohol binge 5 g/kg 50% alcohol/day Small bowel in mice miR-155 expression [156]
Alcohol exposure 25 mm alcohol RAW 264.7 cells miR-155 expression [157]
Alcohol exposure 32.4% alcohol‐derived calories Mice Kupffer cells miR-155 and HDAC11 expressions [158]
Alcohol exposure 5% ethanol Mouse cerebellum miR-155 expression [159]
Alcohol exposure 15% alcohol Mouse brain tissue miR-339-5p expression [160]
Sleep disturbances
REM sleep deprivation Three sessions of 48 h each Rat’s hippocampus HAT/HDAC activity [162]
Sleep-disordered breathing Apnea–hypopnea index Human whole blood samples DNA methylation-age acceleration [164]
Obstructive sleep apnea With and without high levels of hsCRP (1.50 mg/dL) Human whole blood samples FOXP3 and IRF1 gene methylation [165]
Climate (air pollution)
PM2.5 exposure Annual average exposition Human whole blood samples TNF-α methylation [176]
PM2.5 exposure Continuously for 72 h Human whole blood samples TNF-α methylation [177]
PM2.5 exposure 10 μg/m(3) Human whole blood samples TLR2 gene methylation [178]
Traffic-related pollutants exposure 28 days cumulated exposure Human whole blood samples TLR2 gene methylation [179]
Traffic-related pollutants exposure One-week exposure Human whole blood samples F3 gene methylation [180]
Urban PM exposure One-week exposure Mouse lung samples Dnmt3a2 expression [181]

NO2

and PM2.5 exposure

17 years before cerebrovascular disease diagnosis Human whole blood samples DNA methylation of inflammatory pathways DMRs [182]
PM10 exposure Mean of 1 and 14 days Human peripheral blood samples CD14 and TLR4 methylation levels [183]
PM and metal exposure 4 days of steel production work Human peripheral blood samples miR-302b, miR-200c and miR-30d expressions [184]
PM2.5 exposure Two-week periods Human whole blood samples miR-21-5p, miR-187-3p, miR-146a-5p, miR-1-3p and miR-199a-5p expressions [185]
PM2.5 exposure 75 μg/ml Human bronchial epithelial cell line circRNA104250 and lncRNAuc001.dgp.1 expressions [186]
O3 exposure 0.4 ppm O3 for 2 h Sputum samples miR-132, miR-143, miR-145, miR-199a*, miR-199b-5p, miR-222, miR-223, miR-25, miR-424, and miR-582-5p expressions [187]

DMRs Differentially methylated regions