Chemicals, Peptides, and Recombinant Proteins |
BactoAgar |
BD Bioscience |
Cat# 214050 |
D-glucose |
Sigma |
Cat# G7021 |
PD173074 |
Sigma |
Cat# P2499 |
Blebbistatin |
Sigma |
Cat# B0560 |
DiI |
Sigma |
Cat# 42364 |
Recombinant Human/Mouse Wnt-5a Protein |
R&D systems |
Cat# 645-WN-010 |
Recombinant Human Wnt-10b Protein |
R&D systems |
Cat# 7196-WN-010 |
Alginic acid sodium salt |
Sigma |
Cat# 180947 |
Experimental Models: Organisms/Strains |
Wild Type Chicken Eggs |
Charles River |
Cat#10100331 |
Tg(CAG-GFP) Chicken Eggs |
Clemson university (originally by University of Edinburgh; McGrew et al., 2008) |
n/a |
Tg(PGK1:H2 B-chFP) Quail Eggs |
Ozark egg company (Huss et al., 2015) |
n/a |
Recombinant DNA |
pBI-EGFP |
Clontech |
Cat# 6154-1 |
pBI-FGFRdn |
Bénazéraf et al., 2010 |
n/a |
pCIRX-rtTA-Advanced |
Bénazéraf et al., 2010; T. Iimura |
n/a |
pCIG-dnMKK1 |
Delfini et al., 2005 |
n/a |
Software and Algorithms |
Fiji |
NIH |
https://fiji.sc/ |
Matlab (R2017a) |
Mathworks |
https://www.mathworks.com/products/matlab.html |
FluoRender |
SCI, Univ. of Utah |
http://www.sci.utah.edu/software/fluorender.html |
Agent-based mutli-tissue elongation model (in Matlab) |
this paper |
https://scholar.harvard.edu/files/fengzhu_xiong/files/fx_elongation20_modelcode.zip |