Key resources table.
Reagent type (species) or resource |
Designation | Source or reference |
Identifiers | Additional information |
---|---|---|---|---|
Software, algorithm | Marchenko- Pastur-PCA-based algorithm |
PMID:27523449 | See Materials and methods, section Image Pre-processing | |
Software, algorithm | Minimal processing pipeline of the developing human connectome project (dHCP) |
PMID:29409960 | See Materials and methods, section Image Pre-processing | |
Software, algorithm | Eddy current, head movement and EPI geometric distortions correction with outlier replacement and slice-to-volume registration | DW-MRI registration in FSL | RRID:SCR_009461 | See Materials and methods, section Image Pre-processing |
Software, algorithm | Bias field inhomogeneity correction | PMID:20378467 | See Materials and methods, section Image Pre-processing | |
Software, algorithm | Boundary-based registration | PMID:19573611 | See Materials and methods, section Image Pre-processing | |
Software, algorithm | Affine and symmetric normalisation (SyN) part of ANTS - Advanced Normalisation ToolS | PMID:17659998 | RRID:SCR_004757105105105 | See Materials and methods, section Tissue Segmentation and Parcellation |
Software, algorithm | Joint label fusion | PMID:22732662 | See Materials and methods, section Tissue Segmentation and Parcellation | |
Software, algorithm | NODDI | NODDI Matlab Toolbox | RRID:SCR_006826 | See Materials and methods, section Microstructure and volumetric assessments |
Software, algorithm | Constrained spherical deconvolution (CSD); MRtrix | PMID:31473352 | RRID:SCR_006971 | See Materials and methods, section Network Construction Analysis |
Software, algorithm | • Anatomically-constrained tractography (ACT) | PMID:22705374 | See Materials and methods, section Network Construction Analysis | |
Software, algorithm | Fiber orientation distribution (FOD) | PMID:25109526 | See Materials and methods, section Network Construction Analysis | |
Software, algorithm | Spherical-deconvolution informed filtering of tractograms two | PMID:26163802 | See Materials and methods, section Network Construction Analysis | |
Software, algorithm | SPSS | SPSS | RRID:SCR_002865 | |
Software, algorithm | Seaborn | Python data visualisation library https://seaborn.pydata.org/ http://doi.org/10.5281/zenodo.883859 | RRID:SCR_018132 | Figure 1 |
Software, algorithm | ParaView | ParaView | RRID:SCR_002516 | Figure 2 |
Software, algorithm | ITK-SNAP | ITK-SNAP | RRID:SCR_002010 | Figure 2 |
Software, algorithm | Circos | Circos | RRID:SCR_011798 | Figure 3 |
Other | Liquid chromatography-tandem mass spectrometry (LC-MS/MS) | PMID:23584040 | See Materials and methods, section Maternal hair cortisol concentrations (HCC) |