Table 7. Numbers of significant gene-feature pairs with indirect dependencies gene-tissue-feature (g-t-f), feature-gene-tissue (f-g-t), gene-feature-tissue (g-f-t).

Conditional independence tests with α = 0.01 and respectively α = 0.05.

Thresholds	g−f pairs	g−t−f		f−g−t		g−f−t
		α = 0.01	α = 0.05	α = 0.01	α = 0.05	α = 0.01	α = 0.05
corr 0.7 log2 expr 7	27,671	12,442	10,133	5,068	1,486	931	647
corr 0.8 log2 expr 10	2,176	1,495	1,254	37	12	1	1