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A. moschatus was used as reference for SNPs and Indels detection. (a) The number of different types of SNPs. (b) The number of SNPs in LSC, IR and SSC regions. (c) The number of Indels in LSC, IR and SSC regions. (d) Total length of Indels in LSC, IR and SSC regions. (e) Average length of Indels in LSC, IR and SSC regions. LSC: large single copy, SSC: small single copy, IR: inverted-repeat region.
