TABLE 3.
Source attribution scores of French clinical isolatesa
| Set of markers | % (avg score) of clinical isolates from: |
|||
|---|---|---|---|---|
| Chicken | Cattle | Pig | Inconclusive | |
| 259 SNPs | 93.88 (100.0) | 0.0 (0.0) | 6.12 (100.0) | 0.0 (0.0) |
| 7 MLST genes | 60.54 (88.35) | 8.84 (86.91) | 4.08 (83.22) | 26.53 (50.59) |
a
Data for source attribution of French clinical isolate data set using selected SNPs (n = 259) and MLST genes (n = 7). Shown are the distributions of estimated sources among clinical isolates, with average score as the average individual attribution rate. Using determined SNPs, source attribution rates for clinical isolates were constant, whereas using MLST genes, source attribution showed variable results.