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. 2020 Nov 26;30:123–132. doi: 10.1016/j.jare.2020.11.012

Table 2.

Distribution of variations in different genes. Total world Samples in June and October are 46,612 and 89,632, respectively. The VarFreq is the number of variations in the gene divided by the total number of samples. The relative frequency is the number of variations divided. Freq norm is the frequency divided by the total number of variations in each group. N/S is the ration between the number of non-synonymous and synonymous variations in the same gene.

Gene Len Var Count World June Var Count World June Var Count
M 669 464 515 2
N 908 1107 1371 23
E 228 266 320 1
ORF1ab 21,290 14,779 16,221 131
ORF3a 828 809 1003 6
ORF6 186 191 230 1
ORF7a 498 427 524 6
ORF8 193 366 439 4
S 3822 3405 3146 30



Gene len World June World Oct.

Gene len RelativeFreq RelFreqNorm N/S RelativeFreq RelFreqNorm N/S RelativeFreq RelFreqNorm N/S

M 669 0.022 0.032 1.03 0.022 0.033 1.14 0.010 0.015 1
N 908 0.051 0.057 1.88 0.058 0.064 2.14 0.113 0.125 1.75
E 228 0.012 0.054 2.02 0.014 0.060 3.2 0.005 0.021 0
ORF1ab 21,290 0.686 0.032 1.24 0.692 0.032 1.25 0.645 0.030 1.48
ORF3a 828 0.038 0.045 2.38 0.043 0.052 2.5 0.030 0.036 4
ORF6 186 0.009 0.048 1.91 0.010 0.053 2.17 0.005 0.026 0
ORF7a 498 0.020 0.040 1.92 0.022 0.045 2.08 0.030 0.059 2
ORF8 193 0.017 0.088 1.9 0.019 0.097 1.88 0.020 0.102 3
S 3822 0.158 0.041 1.31 0.134 0.035 1.16 0.148 0.039 2