Table 2.
Gene | Len | Var Count World June | Var Count World June | Var Count | ||||||
---|---|---|---|---|---|---|---|---|---|---|
M | 669 | 464 | 515 | 2 | ||||||
N | 908 | 1107 | 1371 | 23 | ||||||
E | 228 | 266 | 320 | 1 | ||||||
ORF1ab | 21,290 | 14,779 | 16,221 | 131 | ||||||
ORF3a | 828 | 809 | 1003 | 6 | ||||||
ORF6 | 186 | 191 | 230 | 1 | ||||||
ORF7a | 498 | 427 | 524 | 6 | ||||||
ORF8 | 193 | 366 | 439 | 4 | ||||||
S | 3822 | 3405 | 3146 | 30 | ||||||
Gene | len | World June | World Oct. | |||||||
Gene | len | RelativeFreq | RelFreqNorm | N/S | RelativeFreq | RelFreqNorm | N/S | RelativeFreq | RelFreqNorm | N/S |
M | 669 | 0.022 | 0.032 | 1.03 | 0.022 | 0.033 | 1.14 | 0.010 | 0.015 | 1 |
N | 908 | 0.051 | 0.057 | 1.88 | 0.058 | 0.064 | 2.14 | 0.113 | 0.125 | 1.75 |
E | 228 | 0.012 | 0.054 | 2.02 | 0.014 | 0.060 | 3.2 | 0.005 | 0.021 | 0 |
ORF1ab | 21,290 | 0.686 | 0.032 | 1.24 | 0.692 | 0.032 | 1.25 | 0.645 | 0.030 | 1.48 |
ORF3a | 828 | 0.038 | 0.045 | 2.38 | 0.043 | 0.052 | 2.5 | 0.030 | 0.036 | 4 |
ORF6 | 186 | 0.009 | 0.048 | 1.91 | 0.010 | 0.053 | 2.17 | 0.005 | 0.026 | 0 |
ORF7a | 498 | 0.020 | 0.040 | 1.92 | 0.022 | 0.045 | 2.08 | 0.030 | 0.059 | 2 |
ORF8 | 193 | 0.017 | 0.088 | 1.9 | 0.019 | 0.097 | 1.88 | 0.020 | 0.102 | 3 |
S | 3822 | 0.158 | 0.041 | 1.31 | 0.134 | 0.035 | 1.16 | 0.148 | 0.039 | 2 |