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. 2020 Oct 23;9(11):3402. doi: 10.3390/jcm9113402

Table 1.

Variants with a worldwide allelic frequency of <1% that were detected in our material more than once. EMAF: European minor allele frequency; ExAC ENFAF: ExAC European non-Finnish allele frequency; nl-C1-INH-HAE AF: allele frequency among nl-C1-INH-HAE patients; C1-INH-HAE AF: allele frequency among C1-INH-HAE patients, P1: EMAF vs. nl-C1-INH-HAE AF, P2: EMAF vs. C1-INH-HAE AF, P3: ni-C1-INH-HAE AF vs. C1-INH-HAE AF.

Genes Coding Amino Acid Change dbSNP SIFT PolyPhen EMAF ExAC ENFAF nl-C1-INH-HAE AF C1-INH-HAE AF P1 P2 P3
BDKRB1 c.721G>A p.Gly241Arg rs45528332 tolerated probably damaging 0.0037 0.0052 0.0113 0.0148 0.1500 0.0350 0.7000
MME c.674G>C p.Gly225Ala rs147564881 tolerated probably damaging 0.0023 0.0033 0.0113 0.0030 0.0310 0.7400 0.2100
PLAUR c.802A>G p.Met268Val rs138492321 tolerated possibly damaging 0.0062 0.0045 0.0188 0.0000 0.0440 0.1500 0.0110
C1S c.943G>A p.Asp315Asn rs117907409 deleterious probably damaging 0.0053 0.0052 0.0113 0.0059 0.2400 0.8300 0.4700
F13B c.1025T>C p.Ile342Thr rs17514281 deleterious possibly damaging 0.0097 0.0098 0.0263 0.0059 0.0380 0.4900 0.0390
F2 c.*97G>A rs1799963 0.0080 0.0263 0.0148 0.0130 0.2600 0.3100
TLR4 c.842G>A p.Cys281Tyr rs137853920 deleterious probably damaging 0.0044 0.0027 0.0150 0.0030 0.0420 0.7900 0.1000
KRT1 c.1669A>G p.Ser557Gly rs77846840 tolerated benign 0.0019 0.0263 0.0296 0.8000
SERPINE1 c.*180C>T rs41334349 0.0110 0.0226 0.0266 0.1400 0.0400 0.7500
AR c.-207C>A rs189146053 0.0000 0.0188 0.0030 <0.0001 0.0844 0.0500
AR c.1174C>T p.Pro392Ser rs201934623 tolerated benign 0.0000 0.0041 0.0113 0.0000 0.0007 0.0500
TPSAB1 c.407A>G p.His136Arg rs201820654 tolerated benign 0.0034 0.0113 0.0089 0.7600
TPSG1 c.508G>A p.Gly170Arg rs117769620 tolerated benign 0.0065 0.0073 0.0188 0.0118 0.0757 0.3893 0.4832
ELANE c.770C>T p.Pro257Leu rs17216663 tolerated benign 0.0108 0.0080 0.0188 0.0030 0.3062 0.1775 0.0530
F12 c.418C>G p.Leu140Val rs35515200 tolerated possibly damaging 0.0042 0.0033 0.0075 0.0030 0.4533 0.7904 0.4287
F12 c.530C>T p.Ala177Val rs144821595 tolerated benign 0.0002 0.0001 0.0075 0.0000 <0.0001 0.7948 0.1103
ACE c.1453C>G p.Pro485Ala rs202178737 deleterious benign 0.0000 0.0001 0.0075 0.0000 0.0059 0.1103
BDKRB1 c.844C>T p.Arg282Ter rs145322761 0.0035 0.0038 0.0075 0.0030 0.4533 0.7904 0.4287
PLG c.266G>A p.Arg89Lys rs143079629 tolerated benign 0.0100 0.0108 0.0075 0.0030 0.7164 0.2177 0.4287
KLK3 c.629C>G p.Ser210Trp rs61729813 deleterious probably damaging 0.0110 0.0109 0.0075 0.0178 0.6223 0.3319 0.2748
DPP4 c.796G>A p.Val266Ile rs56179129 tolerated benign 0.0060 0.0045 0.0075 0.0000 0.7755 0.1547 0.1103
PLAU c.1048T>C p.Tyr350His rs72816325 deleterious probably damaging 0.0058 0.0059 0.0075 0.0000 0.7755 0.1547 0.1103
PLAUR c.-87C>T rs147665588 0.0060 0.0075 0.0089 0.7755 0.5702 0.8550
F13A1 c.1730C>T p.Thr577Met rs143711562 tolerated benign 0.0029 0.0020 0.0075 0.0000 0.2930 0.3149 0.1103
TNF c.251C>T p.Pro84Leu rs4645843 tolerated benign 0.0030 0.0028 0.0075 0.0030 0.2930 0.9945 0.4287
GPER1 c.14C>T p.Ser5Phe rs117290655 tolerated benign 0.0048 0.0045 0.0075 0.0089 0.6173 0.4193 0.8550
MPO c.2031-2A>C rs35897051 0.0072 0.0071 0.0075 0.0059 0.9227 0.8391 0.8096