REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Flow Cytometry Antibodies | ||
Anti-human CD3-BV711 (clone: SK7)-80ug/ml | Biolegend | Cat# 344838; RRID:AB_2565827 |
Anti-human CD4-PE -Texas Red(clone: MHCD0417) | Life Technologies/ Thermo Fisher Scientific | Cat# MHCD0414; RRID: 10371766 |
Anti-human CD8-BV650 (clone: SK1) 100ug/ml | Biolegend | Cat# 344730; RRID:AB_2564510 |
Anti-human CD25-PECy7 (clone: M-A251) | BD Biosciences | Cat# 557741; RRID:AB_396847 |
Anti-human CD27- PerCP-e710 (clone: 0323) | eBioscience | Cat# 46-0279-42; RRID:AB_1834391 |
Anti-human CD31- APC-e780 (clone: WM59) | eBioscience | Cat# 47-0319-42; RRID:AB_10730582 |
Anti-human CD45-APC (clone: HI30) | eBioscience | Cat# 47-0459-41; RRID:AB_1944369 |
Anti-human CD45RA-BV605(clone: HI100) 25ug/ml | Biolegend | Cat# 304134; RRID:AB_2563814 |
Anti-human CD45RO-FITC (clone: UCHL1) | eBioscience | Cat# 11045742; RRID:AB_10596999 |
Anti-human IL2-PE 25ug/ml (MQ1-17H12) | Biolegend | Cat# 500307; RRID:AB_315094 |
Anti-human CD152/CTLA4-PE (clone: 14D3) | Thermo Fisher Scientific | Cat# 12-1529-42; RRID:AB_10805626 |
Anti-human CD278/ICOS-APC (clone: ISA-3) | eBiosceince | Cat# 17-9948-42; RRID:AB_10598209 |
Anti-human FoxP3-e450 (clone: PCH101) | eBioscience | Cat# 48477642; RRID:AB_1834364 |
Anti-human IFNγ− A700(clone: 4S.B3) | Biolegend | Cat# 502520; RRID:AB_528921 |
Anti-human IL-13 –FITC (clone: 85BRD) | Thermo Fisher Scientific | Cat# 11-7136-42; RRID: 2572515 |
Anti-human IL-17A-APC ef-780 (clone: eBio64CAP17) | eBioscience | Cat# 47-7179-41; RRID:AB_11043274 |
Anti-human CD141-APC (Clone:BDCA-3) | Milteny Biotech | Cat# 130-113-314; RRID:AB_2733313 |
Anti-human EpCAM-BV711 (9CY) | Biolegend | Cat# 324240; RRID:AB_2734307 |
Anti-human CD11c-BV605 (B-Ly6) | BD BioSciences | Cat# 563929; RRID:AB_2744276 |
Anti-human Ki-67- PerCyp Cy5.5 (clone: B56) | BD Biosciences | Cat# 561284; RRID:AB_10611574 |
Anti-human IL-22-PE (clone: 142928) | R & D Systems | Cat#IC7821P; RRID:AB_495011 |
Anti-human TNFα−PE-Cy7 (clone: Mab11) | BD BioSciences | Cat#557647; RRID: AB_396764 |
Anti-human CD14-PE-200ug/ml (MFE2) | Biolegend | Cat# 301806; RRID:AB_314188 |
Anti-human CD16-BV421 (3G8) | Biolegend | Cat# 302038; RRID:AB_2561578 |
Anti-human CD1c-PECy7 100ug/ml (clone: L161) | Biolegend | Cat# 331516; RRID:AB_2275574 |
Anti-human CD19-APC (SJ25C1) | Tonbo Bioscience | Cat# 20-0198-T100; RRID: 2621683 |
Anti-human CD24-BV711 (ML5) | BD Biosciences | Cat# 563371; RRID:AB_2738164 |
Anti-human HLA-DR –PercP Cy5.5(clone: Tu36) Anti-human HLA-DR-BV 650 (L243) |
Biolegend Biolegend |
Cat# 361608; RRID:AB_2563198 Cat# 307649; RRID:AB_2562544 |
Anti-human CD1a-AF700 (H1149) | Biolegend | Cat# 300120; RRID:AB_528764 |
Anti-mouse Nur77-PE (12.14) | eBioscience | Cat# 12-5965-82; RRID:AB_1257210 |
Mass Cytometry Antibodies | ||
Anti-human CD45 (clone: H130, Metal: 89Y) | Fluidigm | Cat# 3089003B; RRID: AB_2661851 |
Anti-human CD19 (clone: HIB19, Metal: 142Nd) | Fluidigm | Cat# 3142001B; RRID: AB_2651155 |
Anti-human CD11b (clone: ICRF44, Metal: 144Nd) | Fluidigm | Cat# 3144001B; RRID: AB_2714152 |
Anti-human CD4 (clone: IRPA-T4, Metal: 145Nd) | Fluidigm | Cat# 3145001B; RRID: AB_2661789 |
Anti-human CD11c (clone: BU15, Metal: 147Sm) | Fluidigm | Cat# 3147008B; RRID: AB_2687850 |
Anti-human CD25 (clone: 2A3, Metal: 149Sm) | Fluidigm | Cat# 3149010B; RRID: AB_2756416 |
Anti-human γδTCR (clone: 11F2, Metal: 152Sm) | Fluidigm | Cat# 3152008B; RRID: AB_2687643 |
Anti-human CD8α (clone: RPA-T8, Metal: 53Eu) | Biolegend | Cat# 301002; RRID: AB_2661818 |
Anti-human CD24 (clone: ML5, Metal: 154Sm) | Biolegend | Cat# 311102; RRID:AB_10580644 |
Anti-human CD56 (clone: B159, Metal: 155Gd) | Fluidigm | Cat# 3155008B; RRID: AB_2861412 |
Anti-human CD27 (clone: L128, Metal: 158Gd) | Fluidigm | Cat# 3158010B; RRID: AB_2858231 |
Anti-human PDL1 (clone: 29E.2A3, Metal: 159Tb) | Fluidigm | Cat# 3159029B; RRID:AB_2861413 |
Anti-human CD152/CTLA4 (clone: 14D3, Metal: 161Dy) | Fluidigm | Cat# 3161004B; RRID: AB_2687649 |
Anti-human FoxP3 (clone: PCH101, Metal: 162Dy) | Fluidigm | Cat# 3162011A; RRID: AB_2687650 |
Anti-human CD1c-PECy7 (clone: L161, Metal: 164Dy) | Biolegend | Cat# 331502; RRID: AB_2661820 |
Anti-human PD1 (clone: EH12.2H7, Metal: 166Er) | Biolegend | Cat# 329902; RRID: AB_940488 |
Anti-human Ki-67 (clone: Ki67, Metal: 168Er) | Biolegend | Cat# 3168001B; RRID: AB_2810856 |
Anti-human CD3 (clone: UCHT1, Metal: 170Er) | Fluidigm | Cat# 3170001B; RRID: AB_2811085 |
Anti-human CD45RO (clone: UCHL1, Metal: 173Yb) | Fluidigm | Cat# 3173016D; RRID: AB_2811052 |
Anti-human CD207/Langerin (clone: 4C7, Metal: 175Lu) | Fluidigm | Cat# 3175016B; RRID:AB_2861414 |
Anti-human CD127 (clone: A019D5, Metal: 176Yb) | Fluidigm | Cat# 3176004B; RRID: AB_2687863 |
Immunohistochemistry Antibodies | ||
Anti-human CD4 (clone: 41B2) | Agilent | Cat# IS64930-2; RRID:AB_2861415 |
Anti-human FoxP3 (clone: 236A/E7) | Abcam | Cat# ab20034; RRID: AB_445284 |
Biological Samples | ||
De-identified healthy adult and fetal skin tissue | UCSF-affiliated hospitals | N/A |
Chemicals, Peptides, and Recombinant Proteins | ||
Collagenase from Clostridium histolyticum, Type IV | Sigma-Aldrich | Cat# lS00418 |
DNase | Sigma-Aldrich | Cat# DN25 |
Fetal bovine serum | Fisher scientific | Cat# SH3054103 |
Ghost Dye™ Violet 510 Live/Dead Stain | Tonbo Biosciences | Cat#13-0870-T100 |
FoxP3-staining buffer kit | Invitrogen by Thermofisher | Cat# 00-5523 |
TONBO cell stimulation cocktail | Tonbo Biosciences | Cat# TNB-4975 |
Cisplatin | Sigma-Aldrich | Cat# P4394 |
Intercalator-IR | Fluidigm | Cat# P4394 |
Cell-ID 20-Plex Pd Barcoding Kit | Fluidigm | Cat# 201060 |
BOND Polymer Refine Detection Kit | Leica Biosystems | Cat# DS9800 |
Deposited Data | ||
Raw data | This paper | Flow repository: ID# FR-FCM-Z3YD (url: https://flowrepository.org/) |
Software and Algorithms | ||
GraphPad Prism | GraphPad Software, Inc | https://www.graphpad.com:443/scientific-software/prism/ |
FlowJo v10.5.0 | FlowJo, LLC | https://www.flowjo.com/solutions/flowjo |
R Statistical Computing Software | The R Foundation; https://www.r-project.org/ | https://www.r-project.org/ |
CyTOF Workflow | Nowicka et al., 2017 | https://www.bioconductor.org/packages/release/workflows/html/cytofWorkflow.html |