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. 2020 Nov 17;1(8):100140. doi: 10.1016/j.xcrm.2020.100140
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Mouse anti-CD68 Monoclonal Antibody Abcam Cat# ab955, RRID:AB_307338
Rabbit anti-Osteopontin antibody Abcam Cat# ab8448, RRID:AB_306566
Mouse anti M-CSF R antibody R & D Systems Cat# MAB3291, RRID:AB_2292260
IL6R antibody (Tocilizumab) Roche N/A
Rabbit anti-Albumin Antibody Sigma-Aldrich Cat# A0433, RRID:AB_257887
Goat anti Osteopontin antibody R & D Systems Cat# AF1433, RRID:AB_354791

Biological Samples

Human Serum samples University of Michigan N/A
Human Serum samples Genentech clinic trial for Tociilizmab FaSScinate(NCT01532869)/FcuSSced (NCT02453256) cohorts
Human blood samples Genentech N/A
Human healthy lung samples Northern California Transplant Donor Network N/A
Human SSc lung samples UCSF N/A

Chemicals, Peptides, and Recombinant Proteins

Recombinant human OPN Sigma-Aldrich SRP3131
Human serum albumin Sigma-Aldrich A9080
Recombinant human IL6 R & D Systems 206-IL
Recombinant human MCSF R & D Systems 216-MC

Critical Commercial Assays

Human Osteopontin Quantikine ELISA Kit R & D Systems DOST00
Simple Plex Cartridge Kit for OPN Bio Techne SPCKB-PS-000232
Bio-Plex Pro Human Cytokine 48-plex assay Bio Rad 12007283
CellTiter-Glo Luminescent Cell Viability Assay Promega G7570
Chromium Single Cell 3′ Library and Gel bead kit v2 10x Genomics PN-120267
Pan monocytes isolation kit, human Miltenyi Biotec 130-096-537

Deposited Data

RNA seq for IC stimulated monocytes GSE155687 https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE155687
scRNA seq for fibrotic lung GSE159354

Experimental Models: Cell Lines

Primary human lung fibroblast cells ATCC PCS201013

Software and Algorithms

JMP SAS Institute SCR_014242
Prism 7 GraphPad SCR_005375
Seurat R package version 3.1.1 https://satijalab.org/seurat