Title |
A Transcriptomic Reporter Assay Employing Neutrophils to Measure Immunogenic Activity of Septic Patients Plasma ‐ Neutrophils, experiment I |
A Transcriptomic Reporter Assay Employing Neutrophils to Measure Immunogenic Activity of Septic Patients Plasma ‐ Neutrophils, experiment II |
A Transcriptomic Reporter Assay Employing Neutrophils to Measure Immunogenic Activity of Septic Patients Plasma ‐ Neutrophils, experiment III ‐ |
Genome‐wide analysis of whole blood transcriptional response to community‐acquired Staphylococcus aureus infection in vivo‐ |
Marked alterations of neutrophil functions during sepsis‐induced immunosuppression‐ |
Whole blood mRNA expression profiling of host molecular networks in neonatal sepsis |
Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis‐ |
Expression data for derivation of septic shock subgroups |
References (PMID) |
Khaenam et al. (24612859) |
Khaenam et al. (24612859) |
Khaenam et al. (24612859) |
Banchereau et al (22496797) |
Demaret et al. (27568821) |
Dickinson et al. (26484146), Smith et al. (25120092) |
Pankla et al. (19903332) |
Wong et al. (19624809) |
Samples |
40 |
49 |
56 |
143 |
23 |
63 |
39 |
130 |
Species |
Homo sapiens |
Homo sapiens |
Homo sapiens |
Homo sapiens |
Homo sapiens |
Homo sapiens |
Homo sapiens |
Homo sapiens |
Population age demographics |
Adult |
Adult |
Adult |
Paediatric |
Adult |
Paediatric |
Adult |
Paediatric |
Population geographic location |
Asia |
Asia |
Asia |
North America |
Europe |
Europe and Africa |
Asia |
North America |
Entry criteria |
Cultured‐confirmed sepsis |
Culture‐confirmed sepsis |
Culture‐confirmed sepsis |
Culture‐confirmed sepsis |
Sepsis shock diagnosis |
Suspicion of infection, later confirmed by positive cultures |
Culture‐confirmed sepsis |
Sepsis shock diagnosis |
Assay type |
Microarray |
Microarray |
Microarray |
Microarray |
Microarray |
Microarray |
Microarray |
Microarray |
Microarray manufacturer |
Illumina |
Illumina |
Illumina |
Illumina |
Affymetrix |
Illumina |
Illumina |
Affymetrix |
Study type |
In vitro (cultured with plasma for 6 hr) |
In vitro (cultured with plasma for 6 hr) |
In vitro (cultured with plasma for 6 hr) |
In vivo
|
Ex vivo
|
In vivo
|
Ex vivo
|
In vivo
|
Cell Type |
Neutrophils |
Neutrophils |
Neutrophils |
Whole Blood |
Neutrophils |
Whole Blood |
Whole Blood |
Whole Blood |
Group A |
Uninfected |
Uninfected |
Uninfected |
Control |
Healthy Control |
Neonatal Sepsis Control |
Healthy |
Normal Control |
Group B |
Septic |
Septic |
Septic |
Staphylococcus aureus infection |
Septic Patient |
Infected |
Melioidosis |
Septic Shock Patient |
ANXA3 Exp A |
117 |
34·01 |
59·09 |
94·95 |
1157·40 |
185·87 |
18·77 |
4·17 |
ANXA3 Exp B |
358 |
223·01 |
233·59 |
314·58 |
2789·04 |
506·61 |
253·04 |
24·91 |
B/A |
3·1 |
6·55 |
3·96 |
3·29 |
2·41 |
2·72 |
11·92 |
2·19 |
t‐test |
< 0·05 |
0·02 |
0·002 |
< 0·001 |
0·002 |
< 0·001 |
< 0·001 |
< 0·001 |
F‐test |
< 0·001 |
< 0·001 |
< 0·001 |
< 0·001 |
0·48 |
< 0·001 |
< 0·001 |
< 0·001 |
Dataset GXB Link |
http://sepsis.gxbsidra.org/dm3/geneBrowser/show/4000072
|
http://sepsis.gxbsidra.org/dm3/geneBrowser/show/4000073
|
http://sepsis.gxbsidra.org/dm3/geneBrowser/show/4000074
|
http://sepsis.gxbsidra.org/dm3/geneBrowser/show/4000136
|
http://sepsis.gxbsidra.org/dm3/geneBrowser/show/4000127
|
http://sepsis.gxbsidra.org/dm3/geneBrowser/show/4000104
|
http://sepsis.gxbsidra.org/dm3/geneBrowser/show/4000130
|
http://sepsis.gxbsidra.org/dm3/geneBrowser/show/4000102
|
ANXA3 GXB Link |
http://sepsis.gxbsidra.org/dm3/miniURL/view/Pk
|
http://sepsis.gxbsidra.org/dm3/miniURL/view/OP
|
http://sepsis.gxbsidra.org/dm3/miniURL/view/OU
|
http://sepsis.gxbsidra.org/dm3/miniURL/view/OL
|
http://sepsis.gxbsidra.org/dm3/miniURL/view/Pj
|
http://sepsis.gxbsidra.org/dm3/miniURL/view/ON
|
http://sepsis.gxbsidra.org/dm3/miniURL/view/OT
|
http://sepsis.gxbsidra.org/dm3/miniURL/view/OS
|