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. 2020 Sep 16;41(11):1906–1917. doi: 10.1002/humu.24097

Table 2.

KIFBP missense variants characteristics and classification

cDNA Protein Effect CADD score DANN score GERP++ NR GERP++ RS GERP++ RS rank score MetaLR pred MetaLR score MetaSVM pred MetaSVM score MutationTaster pred MutationTaster score Fathmm‐MKL coding pred Fathmm‐MKL coding score gnomAD exomes AC gnomAD exomes AF gnomAD genomes AC gnomAD genomes AF
NM_015634.4:c.68A>G NP_056449.1:p. Glu23Gly Missense 28.7 0.998 5.73 5.73 0.896 T 0.1142 T 0.831 D 1 D 0.877 420 0.001707 181 0.005845
NM_015634.4:c. 565C>T NP_056449.1:p. Pro189Ser Missense 18.03 0.982 5.79 3.85 0.433 T 0.043 T 1.047 D 0.997 D 0.553 0 0 0 0
NM_015634.4:c.1279A>G NP_056449.1:p. Ser427Gly Missense 28.1 0.998 5.62 5.62 0.856 T 0.462 T 0.013 D 1 D 0.993 6 2.44E‐05 2 6.46E‐05

Abbreviations: A, disease‐causing automatic; cDNA, complementary DNA; D, disease causing; T, tolerated.