TABLE 1.
Differentially expressed genes of each subtypes.
Cluster | Low expressed NK activator ligands | High expressed NK activator ligands | Low expressed NK inhibitor ligands | High expressed NK inhibitor ligands |
Cluster 1 | CFP, CLEC2B, CSF1, CSF3, HLA-E, IL15, TNFRSF10B, TNFRSF14, VIM | CADM1, CD48, CD70, CD80, CD86, CSF2, IL18, MICB, PCNA, RAET1E, RAET1L, SELL, SLAMF6, SLAMF7, ULBP1, | – | PVRL2, CEACAM5, CDH1 |
Cluster 2 | CFP, CLEC2B, CSF1, CSF3, HLA-E, HSPG2, IL15, IL2, MICA, RAET1G, TNFRSF10B, TNFRSF14, ULBP3, VIM, | CADM1, CD48, CD80, CD86, CSF2, IL18, MICB, PCNA, RAET1L, SELL, SLAMF6, SLAMF7, ULBP1 | – | PVRL2, CEACAM5, CDH1 |
Cluster 3 | CLEC2B, HLA-E, IL15, MICA, PDCD1LG2, TNFRSF14, VIM | CADM1, CEACAM1, PCNA, RAET1E, SELL, ULBP1 | – | CEACAM1, PVRL2 |
Cluster 4 | CFP, CLEC2B, CSF1, CSF3, HLA-E, IL15, MICA, TNFRSF10B, TNFRSF14, ULBP3, VIM | CADM1, CD48, CD80, CD86, CSF2, IL18, MICB, PCNA, RAET1L, SELL, SLAMF6, SLAMF7, ULBP1 | – | PVRL2, CEACAM5, CDH1 |